Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA4P43681 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA4P43681 AC126755.2-208ENST00000327792 462 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AC138969.1-213ENST00000331436 462 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RNU6-640P-201ENST00000363693 105 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RNU6-801P-201ENST00000364087 105 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RNU6-1164P-201ENST00000364428 107 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RNU6-166P-201ENST00000384371 107 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RNU6-880P-201ENST00000384526 107 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 U3.19-201ENST00000390893 196 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 Y_RNA.584-201ENST00000391090 114 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AC138623.1-201ENST00000418060 216 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RPL17P36-201ENST00000420302 549 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RPL18P10-201ENST00000425606 538 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AL714022.1-201ENST00000439897 151 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AL353748.1-201ENST00000440753 474 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AC092798.1-201ENST00000458542 409 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 RPS29P19-201ENST00000479709 171 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 CYCSP23-201ENST00000519781 313 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AC018448.1-201ENST00000552843 316 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AC004832.5-201ENST00000608677 401 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AC010999.1-201ENST00000611856 324 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AL391261.4-201ENST00000616012 481 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CHRNA4P43681 AC025521.1-201ENST00000621624 286 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CHRNA4P43681 AC006971.1-201ENST00000407916 4486 ntBASIC4.27□□□□□ -1.73
CHRNA4P43681 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
CHRNA4P43681 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA4P43681 Z73965.1-201ENST00000623412 2297 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA4P43681 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA4P43681 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CHRNA4P43681 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.26□□□□□ -1.73
CHRNA4P43681 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.26□□□□□ -1.73
CHRNA4P43681 CENPCP1-201ENST00000533085 2578 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CHRNA4P43681 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.26□□□□□ -1.73
CHRNA4P43681 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
CHRNA4P43681 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA4P43681 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.26□□□□□ -1.73
CHRNA4P43681 RNU6-1279P-201ENST00000383917 103 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 Y_RNA.572-201ENST00000384757 98 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 MIR487A-201ENST00000385009 80 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 RPS27AP12-201ENST00000429552 465 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 RN7SL303P-201ENST00000469773 251 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 AC139453.3-201ENST00000493276 369 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA4P43681 AC091874.1-201ENST00000511402 339 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 RNA5SP73-201ENST00000516744 108 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.26□□□□□ -1.73
CHRNA4P43681 TVP23BP1-201ENST00000557500 617 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 CYP4A43P-201ENST00000568156 121 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 RN7SL176P-201ENST00000580352 264 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 AC114781.5-201ENST00000615297 108 ntBASIC4.26□□□□□ -1.73
CHRNA4P43681 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
CHRNA4P43681 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA4P43681 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.26□□□□□ -1.73
CHRNA4P43681 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CHRNA4P43681 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
CHRNA4P43681 AC068647.1-201ENST00000489539 2265 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CHRNA4P43681 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.25□□□□□ -1.73
CHRNA4P43681 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.25□□□□□ -1.73
CHRNA4P43681 AC010300.1-201ENST00000600671 5134 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CHRNA4P43681 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 Y_RNA.329-201ENST00000365209 107 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 Y_RNA.348-201ENST00000365403 103 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 Y_RNA.521-201ENST00000384560 114 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 SNORA26.5-201ENST00000391215 123 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 AL591034.1-201ENST00000407447 340 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 RNU6-712P-201ENST00000410558 100 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 RN7SKP27-201ENST00000410684 333 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.25□□□□□ -1.73
CHRNA4P43681 AC009963.1-201ENST00000417265 157 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 AL358075.3-201ENST00000426289 226 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 AL158147.1-201ENST00000443970 75 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA4P43681 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.25□□□□□ -1.73
CHRNA4P43681 NOL8P1-201ENST00000508336 3529 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.25□□□□□ -1.73
CHRNA4P43681 Y_RNA.685-201ENST00000516532 108 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 SNORA31.19-201ENST00000517079 126 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHRNA4P43681 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.25□□□□□ -1.73
CHRNA4P43681 AC133485.4-201ENST00000561835 220 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 AC138907.4-201ENST00000570107 226 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 AL445567.2-201ENST00000618935 498 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 SCARNA4-202ENST00000625402 129 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 MIR1245B-201ENST00000636115 69 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 MIR6715B-201ENST00000637172 77 ntBASIC4.25□□□□□ -1.73
CHRNA4P43681 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms