Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.94□□□□□ -1.78
CCNFP41002 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.94□□□□□ -1.78
CCNFP41002 AC005300.1-201ENST00000428401 373 ntBASIC3.94□□□□□ -1.78
CCNFP41002 AP000907.1-201ENST00000428428 510 ntBASIC3.94□□□□□ -1.78
CCNFP41002 BX679664.1-201ENST00000434429 253 ntBASIC3.94□□□□□ -1.78
CCNFP41002 AC016700.2-201ENST00000446011 156 ntBASIC3.94□□□□□ -1.78
CCNFP41002 SSXP4-201ENST00000451349 245 ntBASIC3.94□□□□□ -1.78
CCNFP41002 CEACAMP4-201ENST00000457676 421 ntBASIC3.94□□□□□ -1.78
CCNFP41002 snoU13.28-201ENST00000459235 104 ntBASIC3.94□□□□□ -1.78
CCNFP41002 MED28P2-201ENST00000475771 317 ntBASIC3.94□□□□□ -1.78
CCNFP41002 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.94□□□□□ -1.78
CCNFP41002 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.94□□□□□ -1.78
CCNFP41002 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 AL391261.3-201ENST00000557194 520 ntBASIC3.94□□□□□ -1.78
CCNFP41002 AC090877.1-201ENST00000561418 344 ntBASIC3.94□□□□□ -1.78
CCNFP41002 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNFP41002 MIR3160-1-201ENST00000577972 85 ntBASIC3.94□□□□□ -1.78
CCNFP41002 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
CCNFP41002 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.94□□□□□ -1.78
CCNFP41002 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNFP41002 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNFP41002 AC068724.3-201ENST00000625906 87 ntBASIC3.94□□□□□ -1.78
CCNFP41002 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNFP41002 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNFP41002 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNFP41002 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.94□□□□□ -1.78
CCNFP41002 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCNFP41002 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CCNFP41002 Y_RNA.16-201ENST00000362421 102 ntBASIC3.93□□□□□ -1.78
CCNFP41002 RNA5SP399-201ENST00000364003 117 ntBASIC3.93□□□□□ -1.78
CCNFP41002 SNORD32A-201ENST00000364805 84 ntBASIC3.93□□□□□ -1.78
CCNFP41002 Y_RNA.416-201ENST00000384014 113 ntBASIC3.93□□□□□ -1.78
CCNFP41002 AL356095.1-201ENST00000417217 199 ntBASIC3.93□□□□□ -1.78
CCNFP41002 RPS15AP7-201ENST00000439294 405 ntBASIC3.93□□□□□ -1.78
CCNFP41002 AC007969.2-201ENST00000441891 191 ntBASIC3.93□□□□□ -1.78
CCNFP41002 AL139109.1-201ENST00000455491 297 ntBASIC3.93□□□□□ -1.78
CCNFP41002 RPL30P12-201ENST00000474666 353 ntBASIC3.93□□□□□ -1.78
CCNFP41002 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.93□□□□□ -1.78
CCNFP41002 AC097462.2-201ENST00000504623 481 ntBASIC3.93□□□□□ -1.78
CCNFP41002 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.93□□□□□ -1.78
CCNFP41002 RNU6-1012P-201ENST00000516606 109 ntBASIC3.93□□□□□ -1.78
CCNFP41002 MIR2116-201ENST00000517221 80 ntBASIC3.93□□□□□ -1.78
CCNFP41002 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.93□□□□□ -1.78
CCNFP41002 CR383656.8-201ENST00000549046 145 ntBASIC3.93□□□□□ -1.78
CCNFP41002 AC024220.1-201ENST00000603675 484 ntBASIC3.93□□□□□ -1.78
CCNFP41002 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCNFP41002 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCNFP41002 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.92□□□□□ -1.78
CCNFP41002 Y_RNA.65-201ENST00000362846 100 ntBASIC3.92□□□□□ -1.78
CCNFP41002 SNORD113-8-201ENST00000363497 74 ntBASIC3.92□□□□□ -1.78
CCNFP41002 SNORD115-32-201ENST00000364079 82 ntBASIC3.92□□□□□ -1.78
CCNFP41002 RNA5SP130-201ENST00000364431 114 ntBASIC3.92□□□□□ -1.78
CCNFP41002 RNU6-338P-201ENST00000383888 105 ntBASIC3.92□□□□□ -1.78
CCNFP41002 BPY2DP-201ENST00000422208 265 ntBASIC3.92□□□□□ -1.78
CCNFP41002 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.92□□□□□ -1.78
CCNFP41002 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.92□□□□□ -1.78
CCNFP41002 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.92□□□□□ -1.78
CCNFP41002 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.92□□□□□ -1.78
CCNFP41002 AC021739.1-201ENST00000559631 174 ntBASIC3.92□□□□□ -1.78
CCNFP41002 MIR1254-2-201ENST00000579553 63 ntBASIC3.92□□□□□ -1.78
CCNFP41002 MIR5695-201ENST00000579717 85 ntBASIC3.92□□□□□ -1.78
CCNFP41002 MIR6868-201ENST00000611215 58 ntBASIC3.92□□□□□ -1.78
CCNFP41002 AC005296.1-201ENST00000616145 209 ntBASIC3.92□□□□□ -1.78
CCNFP41002 AC006111.3-201ENST00000622137 383 ntBASIC3.92□□□□□ -1.78
CCNFP41002 SNORA43.4-201ENST00000629559 138 ntBASIC3.92□□□□□ -1.78
CCNFP41002 MIR3199-2-201ENST00000636243 86 ntBASIC3.92□□□□□ -1.78
CCNFP41002 AL450472.1-202ENST00000637286 180 ntBASIC3.92□□□□□ -1.78
CCNFP41002 AC110491.1-201ENST00000562191 2010 ntBASIC3.92□□□□□ -1.78
CCNFP41002 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.92□□□□□ -1.78
CCNFP41002 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CCNFP41002 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCNFP41002 AC006504.1-201ENST00000562493 3666 ntBASIC3.91□□□□□ -1.78
CCNFP41002 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCNFP41002 RNA5SP361-201ENST00000362686 118 ntBASIC3.91□□□□□ -1.78
CCNFP41002 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CCNFP41002 RNU6-209P-201ENST00000384118 107 ntBASIC3.91□□□□□ -1.78
CCNFP41002 SNORA36A-201ENST00000384221 132 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNA5SP317-201ENST00000410176 116 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNA5SP311-201ENST00000411290 116 ntBASIC3.91□□□□□ -1.78
CCNFP41002 WARS2P1-201ENST00000429678 537 ntBASIC3.91□□□□□ -1.78
CCNFP41002 AC004383.1-201ENST00000438135 289 ntBASIC3.91□□□□□ -1.78
CCNFP41002 HMGN2P10-201ENST00000448085 265 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
CCNFP41002 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCNFP41002 RPS4XP22-201ENST00000480755 780 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNU6-1338P-201ENST00000516328 91 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNA5SP315-201ENST00000516340 116 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNA5SP312-201ENST00000517068 116 ntBASIC3.91□□□□□ -1.78
CCNFP41002 RNU6-1231P-201ENST00000517185 103 ntBASIC3.91□□□□□ -1.78
CCNFP41002 SNORA31.23-201ENST00000517219 133 ntBASIC3.91□□□□□ -1.78
CCNFP41002 AC009163.5-201ENST00000575421 637 ntBASIC3.91□□□□□ -1.78
CCNFP41002 HMGN2P15-201ENST00000585707 270 ntBASIC3.91□□□□□ -1.78
CCNFP41002 AC244505.7-201ENST00000599675 272 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms