Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC006927.3-201ENST00000638789 384 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
BRCA1P38398 RNU6-157P-201ENST00000383957 107 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
BRCA1P38398 RNA5SP450-201ENST00000411206 102 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 MTCO2P8-201ENST00000412213 658 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.56□□□□□ -2.16
BRCA1P38398 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.56□□□□□ -2.16
BRCA1P38398 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AP004607.1-201ENST00000524456 203 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 TRAV32-201ENST00000553993 340 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AC008751.2-201ENST00000597885 980 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 RPL30P11-203ENST00000598995 310 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AL031274.2-201ENST00000599419 203 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AC021646.1-201ENST00000605469 484 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AC091965.4-201ENST00000607691 587 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 Y_RNA.46-201ENST00000362695 102 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 RNU6-433P-201ENST00000363216 104 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 SNORA46.1-201ENST00000391069 153 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 HMGN2P39-201ENST00000398005 273 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 AC114491.1-201ENST00000416095 246 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.55□□□□□ -2.16
BRCA1P38398 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.55□□□□□ -2.16
BRCA1P38398 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.55□□□□□ -2.16
BRCA1P38398 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 GDI2P2-201ENST00000445131 608 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 MTND3P3-201ENST00000505004 126 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.55□□□□□ -2.16
BRCA1P38398 RN7SKP265-201ENST00000516448 223 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 RN7SKP256-201ENST00000517201 314 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.55□□□□□ -2.16
BRCA1P38398 AC022616.8-201ENST00000533569 253 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.55□□□□□ -2.16
BRCA1P38398 AC017037.3-201ENST00000625016 472 ntBASIC1.55□□□□□ -2.16
BRCA1P38398 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
BRCA1P38398 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
BRCA1P38398 RNU6-546P-201ENST00000383991 107 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AL591034.2-201ENST00000402839 359 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.54□□□□□ -2.16
BRCA1P38398 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.54□□□□□ -2.16
BRCA1P38398 AC104685.1-201ENST00000502445 371 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AL096840.1-201ENST00000603287 93 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AL773524.1-201ENST00000614065 229 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AC068787.1-201ENST00000623908 691 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
BRCA1P38398 RNU1-58P-201ENST00000362413 163 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 RNU6-371P-201ENST00000364283 108 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 RNU1-139P-201ENST00000391307 165 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AL356432.1-201ENST00000405809 419 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AL356379.1-201ENST00000414105 126 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AC093106.2-201ENST00000428212 385 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 MTND1P18-201ENST00000448191 573 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 SNORA31.23-201ENST00000517219 133 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.54□□□□□ -2.16
BRCA1P38398 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.54□□□□□ -2.16
BRCA1P38398 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.54□□□□□ -2.16
BRCA1P38398 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.54□□□□□ -2.16
BRCA1P38398 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.54□□□□□ -2.16
BRCA1P38398 DPPA3P3-201ENST00000603842 430 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 AC103706.2-201ENST00000638080 240 ntBASIC1.54□□□□□ -2.16
BRCA1P38398 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
BRCA1P38398 MIR558-201ENST00000384920 94 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 Y_RNA.598-201ENST00000410480 95 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 AC008267.5-201ENST00000424928 265 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.53□□□□□ -2.16
BRCA1P38398 AL009048.1-201ENST00000450437 298 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 RPL30P12-201ENST00000474666 353 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 HMGB1P30-201ENST00000492455 606 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 AC117522.1-201ENST00000509821 380 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.53□□□□□ -2.16
BRCA1P38398 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.53□□□□□ -2.16
BRCA1P38398 AC092325.1-201ENST00000566449 554 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 MIR4713-201ENST00000582691 75 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 AC018714.1-201ENST00000605028 208 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
BRCA1P38398 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.53□□□□□ -2.16
BRCA1P38398 AC068700.1-201ENST00000565862 3754 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.53□□□□□ -2.16
BRCA1P38398 RNU6-931P-201ENST00000363850 107 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 RNU4-1-201ENST00000363925 141 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 SSR1P2-201ENST00000415208 787 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AL354692.1-201ENST00000423044 315 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 MTCYBP5-201ENST00000423752 1135 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AC096920.1-201ENST00000423991 241 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.52□□□□□ -2.17
BRCA1P38398 AL606517.1-201ENST00000446914 387 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 RPL30P1-201ENST00000488676 339 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 RNU5F-2P-201ENST00000516066 82 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 RNU6-586P-201ENST00000517265 104 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AC090821.2-201ENST00000523552 176 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AP005435.4-201ENST00000529514 284 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.52□□□□□ -2.17
BRCA1P38398 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 MIR5000-201ENST00000577717 103 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 MIR3198-2-201ENST00000577868 80 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AL627230.6-201ENST00000611129 280 ntBASIC1.52□□□□□ -2.17
BRCA1P38398 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms