Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC120349.3-201ENST00000624377 529 ntBASIC0.55□□□□□ -2.32
SDC4P31431 Y_RNA.40-201ENST00000362645 93 ntBASIC0.54□□□□□ -2.32
SDC4P31431 AL359634.1-202ENST00000404721 284 ntBASIC0.54□□□□□ -2.32
SDC4P31431 AL117342.1-201ENST00000404861 406 ntBASIC0.54□□□□□ -2.32
SDC4P31431 MTCYBP15-201ENST00000433123 1127 ntBASIC0.54□□□□□ -2.32
SDC4P31431 RPL7P55-201ENST00000450522 746 ntBASIC0.54□□□□□ -2.32
SDC4P31431 SNRPGP9-201ENST00000456025 225 ntBASIC0.54□□□□□ -2.32
SDC4P31431 AC074344.1-201ENST00000512823 224 ntBASIC0.54□□□□□ -2.32
SDC4P31431 RNA5SP481-201ENST00000516814 122 ntBASIC0.54□□□□□ -2.32
SDC4P31431 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.54□□□□□ -2.32
SDC4P31431 HIGD1AP17-201ENST00000554576 276 ntBASIC0.54□□□□□ -2.32
SDC4P31431 AC122134.1-202ENST00000569111 1201 ntBASIC0.54□□□□□ -2.32
SDC4P31431 AC090330.1-201ENST00000588646 764 ntBASIC0.54□□□□□ -2.32
SDC4P31431 BNIP3P30-201ENST00000601184 574 ntBASIC0.54□□□□□ -2.32
SDC4P31431 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.54□□□□□ -2.32
SDC4P31431 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.54□□□□□ -2.32
SDC4P31431 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SDC4P31431 MIR608-201ENST00000384820 100 ntBASIC0.53□□□□□ -2.32
SDC4P31431 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.53□□□□□ -2.32
SDC4P31431 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.53□□□□□ -2.32
SDC4P31431 TIMM9P1-201ENST00000436122 256 ntBASIC0.53□□□□□ -2.32
SDC4P31431 SEPT14P24-201ENST00000447236 180 ntBASIC0.53□□□□□ -2.32
SDC4P31431 AC012308.1-201ENST00000451232 178 ntBASIC0.53□□□□□ -2.32
SDC4P31431 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SDC4P31431 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.53□□□□□ -2.32
SDC4P31431 RPS27P22-201ENST00000478056 241 ntBASIC0.53□□□□□ -2.32
SDC4P31431 RNU6-551P-201ENST00000516661 103 ntBASIC0.53□□□□□ -2.32
SDC4P31431 RNU6-1223P-201ENST00000517124 104 ntBASIC0.53□□□□□ -2.32
SDC4P31431 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.53□□□□□ -2.32
SDC4P31431 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.53□□□□□ -2.32
SDC4P31431 SNRPGP1-201ENST00000553864 222 ntBASIC0.53□□□□□ -2.32
SDC4P31431 AC078795.2-201ENST00000602835 1252 ntBASIC0.53□□□□□ -2.32
SDC4P31431 AC022022.2-201ENST00000602989 360 ntBASIC0.53□□□□□ -2.32
SDC4P31431 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
SDC4P31431 AC092656.1-203ENST00000624134 423 ntBASIC0.53□□□□□ -2.32
SDC4P31431 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
SDC4P31431 LINC02555-201ENST00000563933 1951 ntBASIC0.53□□□□□ -2.32
SDC4P31431 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SDC4P31431 CDR1-202ENST00000625883 1485 ntBASIC0.53□□□□□ -2.33
SDC4P31431 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
SDC4P31431 RNU6-858P-201ENST00000362436 107 ntBASIC0.52□□□□□ -2.33
SDC4P31431 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
SDC4P31431 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
SDC4P31431 Y_RNA.226-201ENST00000364337 114 ntBASIC0.52□□□□□ -2.33
SDC4P31431 Y_RNA.238-201ENST00000364441 102 ntBASIC0.52□□□□□ -2.33
SDC4P31431 RNU6-883P-201ENST00000384597 107 ntBASIC0.52□□□□□ -2.33
SDC4P31431 AL356776.1-201ENST00000406574 447 ntBASIC0.52□□□□□ -2.33
SDC4P31431 RNU2-23P-201ENST00000410545 195 ntBASIC0.52□□□□□ -2.33
SDC4P31431 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.52□□□□□ -2.33
SDC4P31431 AL591212.2-201ENST00000433923 257 ntBASIC0.52□□□□□ -2.33
SDC4P31431 SEPT7P5-201ENST00000434048 306 ntBASIC0.52□□□□□ -2.33
SDC4P31431 RPS27AP8-201ENST00000452665 445 ntBASIC0.52□□□□□ -2.33
SDC4P31431 AL353752.1-201ENST00000454946 260 ntBASIC0.52□□□□□ -2.33
SDC4P31431 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.52□□□□□ -2.33
SDC4P31431 AC104563.1-201ENST00000476147 376 ntBASIC0.52□□□□□ -2.33
SDC4P31431 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.52□□□□□ -2.33
SDC4P31431 RNU6-143P-201ENST00000516942 93 ntBASIC0.52□□□□□ -2.33
SDC4P31431 SNORA31.19-201ENST00000517079 126 ntBASIC0.52□□□□□ -2.33
SDC4P31431 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.52□□□□□ -2.33
SDC4P31431 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.52□□□□□ -2.33
SDC4P31431 HMGB1P33-201ENST00000563485 527 ntBASIC0.52□□□□□ -2.33
SDC4P31431 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.52□□□□□ -2.33
SDC4P31431 MIR3664-201ENST00000579074 99 ntBASIC0.52□□□□□ -2.33
SDC4P31431 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.52□□□□□ -2.33
SDC4P31431 AL078603.1-201ENST00000603824 313 ntBASIC0.52□□□□□ -2.33
SDC4P31431 BNIP3P31-201ENST00000604515 566 ntBASIC0.52□□□□□ -2.33
SDC4P31431 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.52□□□□□ -2.33
SDC4P31431 AC084824.5-201ENST00000612009 413 ntBASIC0.52□□□□□ -2.33
SDC4P31431 AC016911.1-201ENST00000613297 452 ntBASIC0.52□□□□□ -2.33
SDC4P31431 AC040896.1-201ENST00000613819 479 ntBASIC0.52□□□□□ -2.33
SDC4P31431 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
SDC4P31431 RNU6-622P-201ENST00000384272 103 ntBASIC0.51□□□□□ -2.33
SDC4P31431 SNORA40C-201ENST00000391285 128 ntBASIC0.51□□□□□ -2.33
SDC4P31431 AL357139.1-201ENST00000407792 426 ntBASIC0.51□□□□□ -2.33
SDC4P31431 UBE2V1P10-201ENST00000414685 269 ntBASIC0.51□□□□□ -2.33
SDC4P31431 AC083875.1-201ENST00000419509 405 ntBASIC0.51□□□□□ -2.33
SDC4P31431 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.51□□□□□ -2.33
SDC4P31431 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.51□□□□□ -2.33
SDC4P31431 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
SDC4P31431 TPRKBP1-201ENST00000456243 481 ntBASIC0.51□□□□□ -2.33
SDC4P31431 RPF2P2-201ENST00000504693 896 ntBASIC0.51□□□□□ -2.33
SDC4P31431 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.51□□□□□ -2.33
SDC4P31431 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
SDC4P31431 RNA5SP503-201ENST00000517047 117 ntBASIC0.51□□□□□ -2.33
SDC4P31431 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SDC4P31431 SLC2A13P1-201ENST00000531560 322 ntBASIC0.51□□□□□ -2.33
SDC4P31431 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.51□□□□□ -2.33
SDC4P31431 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.51□□□□□ -2.33
SDC4P31431 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.51□□□□□ -2.33
SDC4P31431 AC008751.2-201ENST00000597885 980 ntBASIC0.51□□□□□ -2.33
SDC4P31431 SNORD114-24-201ENST00000365029 72 ntBASIC0.5□□□□□ -2.33
SDC4P31431 MIR194-1-201ENST00000384892 85 ntBASIC0.5□□□□□ -2.33
SDC4P31431 MIR1287-201ENST00000408492 90 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 RAC1P6-201ENST00000423911 575 ntBASIC0.5□□□□□ -2.33
SDC4P31431 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
SDC4P31431 GTF2IP13-201ENST00000438487 386 ntBASIC0.5□□□□□ -2.33
SDC4P31431 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.5□□□□□ -2.33
SDC4P31431 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms