Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.12□□□□□ -2.23
CASQ1P31415 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.12□□□□□ -2.23
CASQ1P31415 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.12□□□□□ -2.23
CASQ1P31415 AC109445.1-201ENST00000512356 383 ntBASIC1.12□□□□□ -2.23
CASQ1P31415 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.12□□□□□ -2.23
CASQ1P31415 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.12□□□□□ -2.23
CASQ1P31415 AC009712.1-201ENST00000564938 316 ntBASIC1.12□□□□□ -2.23
CASQ1P31415 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.12□□□□□ -2.23
CASQ1P31415 AC091135.1-201ENST00000585943 307 ntBASIC1.12□□□□□ -2.23
CASQ1P31415 KC877982.1-201ENST00000602313 470 ntBASIC1.12□□□□□ -2.23
CASQ1P31415 AL136363.2-201ENST00000604173 851 ntBASIC1.12□□□□□ -2.23
CASQ1P31415 AC069114.2-201ENST00000604699 304 ntBASIC1.12□□□□□ -2.23
CASQ1P31415 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.12□□□□□ -2.23
CASQ1P31415 AC123900.1-201ENST00000420390 96 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 TXNL1P1-201ENST00000429528 554 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.11□□□□□ -2.23
CASQ1P31415 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.11□□□□□ -2.23
CASQ1P31415 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.11□□□□□ -2.23
CASQ1P31415 AC119751.4-201ENST00000507498 357 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 SNORD116-28-201ENST00000516123 91 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CASQ1P31415 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.11□□□□□ -2.23
CASQ1P31415 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.11□□□□□ -2.23
CASQ1P31415 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.11□□□□□ -2.23
CASQ1P31415 MIR4421-201ENST00000578133 69 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.11□□□□□ -2.23
CASQ1P31415 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 AL512506.1-201ENST00000613918 449 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 AC092140.2-201ENST00000618027 521 ntBASIC1.11□□□□□ -2.23
CASQ1P31415 SNORD56.1-201ENST00000362913 68 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 RNU2-62P-201ENST00000410868 191 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 AC092809.3-201ENST00000415453 231 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.1□□□□□ -2.23
CASQ1P31415 RPL39P28-201ENST00000465655 155 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 AC079395.1-201ENST00000510981 262 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 SNORA43.2-201ENST00000516652 128 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 AC091163.3-201ENST00000518269 1144 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.1□□□□□ -2.23
CASQ1P31415 MZT1P2-201ENST00000604387 248 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 AC131235.4-201ENST00000609288 620 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 U6.42-201ENST00000618440 107 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 AL512427.1-201ENST00000618593 349 ntBASIC1.1□□□□□ -2.23
CASQ1P31415 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CASQ1P31415 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
CASQ1P31415 AC010615.1-201ENST00000594254 1764 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 MIR634-201ENST00000385208 97 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 MIR548B-201ENST00000385247 97 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 PIGPP2-201ENST00000411569 458 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 RPS25P9-201ENST00000435591 252 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 AL022238.1-201ENST00000442557 355 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 HSPE1P13-201ENST00000451143 297 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.09□□□□□ -2.23
CASQ1P31415 Y_RNA.687-201ENST00000516558 91 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 RNA5SP437-201ENST00000517249 129 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.09□□□□□ -2.23
CASQ1P31415 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.09□□□□□ -2.23
CASQ1P31415 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.09□□□□□ -2.23
CASQ1P31415 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.09□□□□□ -2.23
CASQ1P31415 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.09□□□□□ -2.23
CASQ1P31415 AC024060.1-201ENST00000607052 494 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
CASQ1P31415 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CASQ1P31415 RNU4-22P-201ENST00000411058 166 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 BTF3P4-201ENST00000418852 495 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.08□□□□□ -2.24
CASQ1P31415 PRPS1P1-201ENST00000445305 876 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.08□□□□□ -2.24
CASQ1P31415 AC079140.3-201ENST00000511111 550 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.08□□□□□ -2.24
CASQ1P31415 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.08□□□□□ -2.24
CASQ1P31415 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 7SK.13-201ENST00000622040 250 ntBASIC1.08□□□□□ -2.24
CASQ1P31415 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CASQ1P31415 RNU6-946P-201ENST00000383878 107 ntBASIC1.07□□□□□ -2.24
CASQ1P31415 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CASQ1P31415 RPS3AP36-201ENST00000398190 775 ntBASIC1.07□□□□□ -2.24
CASQ1P31415 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
CASQ1P31415 AL590229.1-201ENST00000603497 542 ntBASIC1.07□□□□□ -2.24
CASQ1P31415 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.07□□□□□ -2.24
CASQ1P31415 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CASQ1P31415 SNORD32B-201ENST00000364460 84 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.06□□□□□ -2.24
CASQ1P31415 RPL21P90-201ENST00000415692 466 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 POLR2J4-204ENST00000418424 324 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 BTBD7P2-201ENST00000441962 620 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 AL122001.1-201ENST00000457027 370 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 RN7SKP210-201ENST00000459176 261 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.06□□□□□ -2.24
CASQ1P31415 AC112206.3-201ENST00000514578 389 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 MIR449C-201ENST00000516047 92 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 RNU5F-2P-201ENST00000516066 82 ntBASIC1.06□□□□□ -2.24
CASQ1P31415 Y_RNA.689-201ENST00000516589 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms