Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC087385.3-201ENST00000620477 187 ntBASIC4.71□□□□□ -1.66
VARSP26640 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.71□□□□□ -1.66
VARSP26640 MIR3529-201ENST00000637713 78 ntBASIC4.71□□□□□ -1.66
VARSP26640 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VARSP26640 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.71□□□□□ -1.66
VARSP26640 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VARSP26640 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.71□□□□□ -1.66
VARSP26640 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VARSP26640 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
VARSP26640 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARSP26640 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VARSP26640 AL672167.1-203ENST00000641299 2975 ntBASIC4.7□□□□□ -1.66
VARSP26640 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARSP26640 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARSP26640 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.7□□□□□ -1.66
VARSP26640 AC079741.1-201ENST00000321498 212 ntBASIC4.7□□□□□ -1.66
VARSP26640 SNORD115-30-201ENST00000364117 82 ntBASIC4.7□□□□□ -1.66
VARSP26640 Y_RNA.229-201ENST00000364347 113 ntBASIC4.7□□□□□ -1.66
VARSP26640 RNU6-1280P-201ENST00000365211 107 ntBASIC4.7□□□□□ -1.66
VARSP26640 SNORD96B-201ENST00000386148 79 ntBASIC4.7□□□□□ -1.66
VARSP26640 MIR708-201ENST00000390708 88 ntBASIC4.7□□□□□ -1.66
VARSP26640 RNU6-1228P-201ENST00000391014 107 ntBASIC4.7□□□□□ -1.66
VARSP26640 MIR298-201ENST00000401212 88 ntBASIC4.7□□□□□ -1.66
VARSP26640 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
VARSP26640 RNU6-855P-201ENST00000410395 104 ntBASIC4.7□□□□□ -1.66
VARSP26640 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.7□□□□□ -1.66
VARSP26640 RPL23AP56-201ENST00000460778 453 ntBASIC4.7□□□□□ -1.66
VARSP26640 RPL31P41-201ENST00000477967 372 ntBASIC4.7□□□□□ -1.66
VARSP26640 AC090525.1-201ENST00000479116 478 ntBASIC4.7□□□□□ -1.66
VARSP26640 AC078918.1-201ENST00000498515 228 ntBASIC4.7□□□□□ -1.66
VARSP26640 RNU6-772P-201ENST00000516042 105 ntBASIC4.7□□□□□ -1.66
VARSP26640 MIR3667-201ENST00000581025 74 ntBASIC4.7□□□□□ -1.66
VARSP26640 AC025946.2-201ENST00000603398 234 ntBASIC4.7□□□□□ -1.66
VARSP26640 SNRPGP20-201ENST00000604477 205 ntBASIC4.7□□□□□ -1.66
VARSP26640 AL591034.3-201ENST00000605511 685 ntBASIC4.7□□□□□ -1.66
VARSP26640 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VARSP26640 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VARSP26640 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARSP26640 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.7□□□□□ -1.66
VARSP26640 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VARSP26640 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VARSP26640 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
VARSP26640 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.69□□□□□ -1.66
VARSP26640 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 RN7SKP280-201ENST00000364196 304 ntBASIC4.69□□□□□ -1.66
VARSP26640 SNORA7.2-201ENST00000364446 145 ntBASIC4.69□□□□□ -1.66
VARSP26640 SNORA40.5-201ENST00000391061 128 ntBASIC4.69□□□□□ -1.66
VARSP26640 SNORA75.5-201ENST00000391291 81 ntBASIC4.69□□□□□ -1.66
VARSP26640 MIR208B-201ENST00000401172 77 ntBASIC4.69□□□□□ -1.66
VARSP26640 AC112498.1-201ENST00000444401 332 ntBASIC4.69□□□□□ -1.66
VARSP26640 AC073264.2-201ENST00000448886 166 ntBASIC4.69□□□□□ -1.66
VARSP26640 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.69□□□□□ -1.66
VARSP26640 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.69□□□□□ -1.66
VARSP26640 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.69□□□□□ -1.66
VARSP26640 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.69□□□□□ -1.66
VARSP26640 Y_RNA.694-201ENST00000516677 117 ntBASIC4.69□□□□□ -1.66
VARSP26640 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.69□□□□□ -1.66
VARSP26640 Y_RNA.757-201ENST00000578934 114 ntBASIC4.69□□□□□ -1.66
VARSP26640 AL162713.1-201ENST00000604480 262 ntBASIC4.69□□□□□ -1.66
VARSP26640 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.69□□□□□ -1.66
VARSP26640 U6.95-201ENST00000636931 70 ntBASIC4.69□□□□□ -1.66
VARSP26640 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.69□□□□□ -1.66
VARSP26640 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VARSP26640 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.68□□□□□ -1.66
VARSP26640 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
VARSP26640 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VARSP26640 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VARSP26640 Y_RNA.341-201ENST00000365341 102 ntBASIC4.68□□□□□ -1.66
VARSP26640 U1.1-201ENST00000384101 164 ntBASIC4.68□□□□□ -1.66
VARSP26640 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.68□□□□□ -1.66
VARSP26640 RN7SL817P-201ENST00000480777 288 ntBASIC4.68□□□□□ -1.66
VARSP26640 AC103975.1-201ENST00000482506 483 ntBASIC4.68□□□□□ -1.66
VARSP26640 AP006289.1-201ENST00000538089 277 ntBASIC4.68□□□□□ -1.66
VARSP26640 AC093249.4-201ENST00000564755 259 ntBASIC4.68□□□□□ -1.66
VARSP26640 AC009163.5-201ENST00000575421 637 ntBASIC4.68□□□□□ -1.66
VARSP26640 SNORA74C-1-201ENST00000580726 201 ntBASIC4.68□□□□□ -1.66
VARSP26640 AC011471.1-201ENST00000585766 187 ntBASIC4.68□□□□□ -1.66
VARSP26640 AL391358.1-201ENST00000605342 190 ntBASIC4.68□□□□□ -1.66
VARSP26640 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.68□□□□□ -1.66
VARSP26640 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.68□□□□□ -1.66
VARSP26640 MAPK10-320ENST00000641462 6696 ntBASIC4.68□□□□□ -1.66
VARSP26640 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
VARSP26640 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
VARSP26640 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.68□□□□□ -1.66
VARSP26640 ADAM3A-203ENST00000461344 2157 ntBASIC4.67□□□□□ -1.66
VARSP26640 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARSP26640 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VARSP26640 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARSP26640 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
VARSP26640 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VARSP26640 RNA5SP189-201ENST00000364920 115 ntBASIC4.67□□□□□ -1.66
VARSP26640 Y_RNA.368-201ENST00000365547 113 ntBASIC4.67□□□□□ -1.66
VARSP26640 RNU6-217P-201ENST00000384164 104 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms