Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 U3.4-201ENST00000363352 213 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 Y_RNA.201-201ENST00000364052 96 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-11P-201ENST00000364234 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-25P-201ENST00000383873 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-1-201ENST00000383898 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-48P-201ENST00000384161 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-36P-201ENST00000384172 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-4P-201ENST00000384205 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-5P-201ENST00000384238 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-3P-201ENST00000384314 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-16P-201ENST00000384385 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-456P-201ENST00000384493 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-15P-201ENST00000384534 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-2-201ENST00000384627 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-29P-201ENST00000384637 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-9-201ENST00000384776 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-33P-201ENST00000384793 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 Y_RNA.597-201ENST00000410463 100 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-248P-201ENST00000410720 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-1245P-201ENST00000411130 106 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DPA1P20036 AL669831.1-202ENST00000428504 417 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DPA1P20036 GTF2IP13-201ENST00000438487 386 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 FDX1P2-201ENST00000450769 375 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RPL9P6-201ENST00000492764 598 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DPA1P20036 PTP4A1P4-201ENST00000512479 322 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-377P-201ENST00000515965 102 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 AC018630.3-201ENST00000542637 96 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DPA1P20036 AC145350.1-201ENST00000567426 208 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 AL109918.3-201ENST00000603072 338 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 RNU6-6P-201ENST00000606623 107 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
HLA-DPA1P20036 AC091834.1-201ENST00000614543 472 ntBASIC2.12□□□□□ -2.07
HLA-DPA1P20036 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DPA1P20036 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RNU6-743P-201ENST00000364151 106 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RNU6-282P-201ENST00000365357 103 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RNU4-48P-201ENST00000365559 182 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RNU6-1222P-201ENST00000384615 107 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RNU4-46P-201ENST00000410818 138 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AL158823.1-201ENST00000418441 478 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AL590556.1-201ENST00000423231 483 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RPS15AP10-201ENST00000432472 382 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC022364.2-201ENST00000457963 554 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 MTND3P7-201ENST00000474435 343 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 RPS29P21-201ENST00000496272 170 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 MRPS17P9-201ENST00000511924 393 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 MTCO3P28-201ENST00000513351 515 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AL590229.1-201ENST00000603497 542 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 Z94722.1-201ENST00000604328 474 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC087241.4-201ENST00000612441 480 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
HLA-DPA1P20036 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HLA-DPA1P20036 AC009487.4-201ENST00000624969 3585 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 RNU6-105P-201ENST00000363909 104 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 RNU6-1303P-201ENST00000364841 107 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 SNORD14D-201ENST00000384390 87 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 BTF3L4P2-201ENST00000392798 346 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 PIGFP2-201ENST00000421400 651 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 HMGN2P19-201ENST00000425149 265 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AC133104.1-201ENST00000429100 218 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 MTCO3P7-201ENST00000510008 774 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 RNU1-41P-201ENST00000516161 162 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 RNU1-48P-201ENST00000516400 162 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 uc_338.11-201ENST00000619132 160 ntBASIC2.1□□□□□ -2.07
HLA-DPA1P20036 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 RNU6-181P-201ENST00000363225 107 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms