Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MIR7975-201ENST00000619350 68 ntBASIC3.69□□□□□ -1.82
PTPN1P18031 AL159153.1-201ENST00000619688 317 ntBASIC3.69□□□□□ -1.82
PTPN1P18031 AC097372.5-201ENST00000623665 376 ntBASIC3.69□□□□□ -1.82
PTPN1P18031 AC241585.2-209ENST00000638217 143 ntBASIC3.69□□□□□ -1.82
PTPN1P18031 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
PTPN1P18031 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PTPN1P18031 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN1P18031 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN1P18031 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTPN1P18031 Y_RNA.214-201ENST00000364201 112 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN1P18031 RNU6-1035P-201ENST00000384477 107 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 MIR190B-201ENST00000401119 79 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 RNU2-37P-201ENST00000410695 177 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN1P18031 NDUFS5P4-201ENST00000412983 318 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 ELOCP20-201ENST00000422460 345 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AL591043.1-201ENST00000432461 424 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN1P18031 PRSS3P4-201ENST00000453323 162 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 RPL23AP14-201ENST00000468281 468 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC026784.1-201ENST00000507986 352 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 RNY3P15-201ENST00000516297 97 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN1P18031 IGKV2-26-201ENST00000518305 343 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC109329.1-201ENST00000518744 317 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC091144.1-201ENST00000519573 138 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 IGHV3-76-201ENST00000522465 295 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN1P18031 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN1P18031 AC090517.1-201ENST00000569307 266 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC060766.3-201ENST00000591442 263 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC125232.2-201ENST00000592457 143 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 AC020895.1-201ENST00000595362 272 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 MIR6134-201ENST00000617606 109 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PTPN1P18031 AC092628.2-201ENST00000622492 339 ntBASIC3.68□□□□□ -1.82
PTPN1P18031 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTPN1P18031 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTPN1P18031 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PTPN1P18031 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN1P18031 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN1P18031 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN1P18031 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN1P18031 Y_RNA.405-201ENST00000383979 100 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 Y_RNA.451-201ENST00000384200 100 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 Y_RNA.524-201ENST00000384564 100 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 Y_RNA.561-201ENST00000384694 100 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN1P18031 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN1P18031 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN1P18031 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN1P18031 FCF1P4-201ENST00000448326 183 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AL513124.1-201ENST00000450410 614 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 HMGN2P16-201ENST00000456802 261 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN1P18031 RPL7P47-201ENST00000497299 556 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN1P18031 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN1P18031 RNU7-175P-201ENST00000515915 61 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 RNU6-928P-201ENST00000516876 104 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 SNORA40.15-201ENST00000516884 107 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AC034114.1-201ENST00000520293 285 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AC011602.1-201ENST00000546484 331 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN1P18031 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN1P18031 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.67□□□□□ -1.82
PTPN1P18031 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN1P18031 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPN1P18031 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AC084757.4-201ENST00000616350 526 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 AC243829.7-201ENST00000633081 225 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN1P18031 AL133383.2-201ENST00000622958 2336 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN1P18031 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN1P18031 AC009541.1-201ENST00000438279 2662 ntBASIC3.67□□□□□ -1.82
PTPN1P18031 CUL1P1-201ENST00000509510 2425 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
PTPN1P18031 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN1P18031 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN1P18031 Y_RNA.307-201ENST00000365022 117 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 RNU1-100P-201ENST00000365255 165 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 Y_RNA.333-201ENST00000365274 102 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 Y_RNA.461-201ENST00000384263 103 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 Y_RNA.471-201ENST00000384312 102 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PTPN1P18031 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN1P18031 RN7SKP111-201ENST00000410349 271 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPN1P18031 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPN1P18031 AP000907.1-201ENST00000428428 510 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.66□□□□□ -1.82
PTPN1P18031 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.66□□□□□ -1.82
PTPN1P18031 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPN1P18031 SNRPGP3-201ENST00000469405 227 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 RPS27AP10-201ENST00000496103 208 ntBASIC3.66□□□□□ -1.82
PTPN1P18031 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.66□□□□□ -1.82
PTPN1P18031 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.66□□□□□ -1.82
PTPN1P18031 AC074250.1-201ENST00000511117 192 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms