| CPA3 | P15088 | AC006386.2-201 | ENST00000624491 | 75 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CPA3 | P15088 | AC012005.1-201 | ENST00000624575 | 75 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CPA3 | P15088 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| CPA3 | P15088 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CPA3 | P15088 | ANKAR-201 | ENST00000313581 | 4391 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.05 | | |
| CPA3 | P15088 | MTND5P26-201 | ENST00000426018 | 1752 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-996P-201 | ENST00000365438 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | Y_RNA.399-201 | ENST00000383955 | 105 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU4-55P-201 | ENST00000410731 | 137 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | BTF3L4P1-201 | ENST00000413813 | 468 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC010975.2-201 | ENST00000427781 | 588 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC012308.1-201 | ENST00000451232 | 178 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SNRPFP3-201 | ENST00000457792 | 225 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC018868.1-201 | ENST00000491307 | 315 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CCDC34P1-201 | ENST00000507441 | 517 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC008413.1-201 | ENST00000511864 | 177 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU4ATAC8P-201 | ENST00000516196 | 109 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | MDM2-221 | ENST00000517852 | 393 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC021785.1-201 | ENST00000520780 | 453 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC069120.1-201 | ENST00000521623 | 379 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC009127.3-201 | ENST00000570531 | 403 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC087749.2-201 | ENST00000583910 | 352 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC002044.1-201 | ENST00000606707 | 158 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC017083.3-201 | ENST00000609955 | 700 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-105P-201 | ENST00000363909 | 104 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU2-63P-201 | ENST00000410792 | 194 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SNORD56-201 | ENST00000413522 | 71 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL606489.2-201 | ENST00000433886 | 234 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | DNAJC19P4-201 | ENST00000440115 | 345 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RPL30P12-201 | ENST00000474666 | 353 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL163973.1-201 | ENST00000484753 | 577 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | HYDIN2-201 | ENST00000493714 | 554 nt | TSL 4 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RN7SL636P-201 | ENST00000497504 | 294 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | MEF2C-AS1-212 | ENST00000514158 | 713 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNA5SP356-201 | ENST00000515972 | 94 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SNORA48.11-201 | ENST00000517015 | 89 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL358937.1-201 | ENST00000524512 | 336 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP001783.1-202 | ENST00000534620 | 408 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC025575.1-201 | ENST00000548497 | 544 nt | TSL 4 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | IMMP1LP2-201 | ENST00000552954 | 492 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC138625.1-201 | ENST00000567556 | 483 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC005154.1-222 | ENST00000579024 | 341 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | MIR4424-201 | ENST00000585257 | 86 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC091805.2-201 | ENST00000603848 | 235 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC048344.4-201 | ENST00000619744 | 527 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | LINC02033-202 | ENST00000623312 | 492 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC097372.5-201 | ENST00000623665 | 376 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SCARNA15.3-201 | ENST00000626315 | 122 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SCARNA4.1-201 | ENST00000628597 | 123 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CGGBP1-202 | ENST00000398392 | 5298 nt | APPRIS P1 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNA5SP240-201 | ENST00000365355 | 128 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | Y_RNA.480-201 | ENST00000384364 | 102 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL663109.1-201 | ENST00000411498 | 844 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL451060.1-203 | ENST00000431307 | 362 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | LINC02336-201 | ENST00000434117 | 330 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL390067.1-201 | ENST00000440009 | 420 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC016691.1-201 | ENST00000441321 | 413 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | FDX1P2-201 | ENST00000450769 | 375 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC013470.1-201 | ENST00000453438 | 462 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CYP2C59P-201 | ENST00000457790 | 269 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC012312.1-201 | ENST00000503710 | 527 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC027343.1-201 | ENST00000504765 | 407 nt | TSL 4 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SNORA40.12-201 | ENST00000516329 | 111 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | MIR514B-201 | ENST00000516774 | 80 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU4ATAC17P-201 | ENST00000517272 | 120 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | IL7-206 | ENST00000520269 | 456 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC069133.1-201 | ENST00000522857 | 566 nt | TSL 4 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CYCSP26-201 | ENST00000534107 | 320 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC026470.3-201 | ENST00000563994 | 438 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | PWRN1-205 | ENST00000565295 | 465 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC007610.2-201 | ENST00000566770 | 666 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC012507.3-201 | ENST00000603556 | 477 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP001330.5-201 | ENST00000607176 | 411 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC009090.3-201 | ENST00000616553 | 565 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL354950.2-201 | ENST00000617939 | 290 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC009831.4-201 | ENST00000620744 | 325 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC068792.1-201 | ENST00000621354 | 417 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC023490.3-201 | ENST00000621762 | 358 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP000550.4-201 | ENST00000639507 | 358 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP3S1-209 | ENST00000640413 | 489 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 2.19 | □□□□□ -2.06 | | |
| CPA3 | P15088 | TTK-202 | ENST00000369798 | 3010 nt | APPRIS P3 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-1210P-201 | ENST00000363775 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-266P-201 | ENST00000364225 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-259P-201 | ENST00000383999 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SNORA67.4-201 | ENST00000384688 | 142 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | TRAV34-201 | ENST00000390461 | 349 nt | APPRIS P1 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | TRAJ49-201 | ENST00000390488 | 56 nt | APPRIS P1 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC004014.1-201 | ENST00000413406 | 538 nt | TSL 4 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC083867.1-201 | ENST00000413567 | 457 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | LINC00459-201 | ENST00000431656 | 376 nt | TSL 2 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | INTS6-AS1-201 | ENST00000434512 | 466 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |