Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR6844-201ENST00000637122 62 ntBASIC4.16□□□□□ -1.74
NID1P14543 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.16□□□□□ -1.74
NID1P14543 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NID1P14543 AC006971.1-201ENST00000407916 4486 ntBASIC4.16□□□□□ -1.74
NID1P14543 MTND5P32-201ENST00000560711 1802 ntBASIC4.16□□□□□ -1.74
NID1P14543 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.16□□□□□ -1.74
NID1P14543 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NID1P14543 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.15□□□□□ -1.74
NID1P14543 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NID1P14543 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.15□□□□□ -1.75
NID1P14543 Y_RNA.24-201ENST00000362508 103 ntBASIC4.15□□□□□ -1.75
NID1P14543 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.15□□□□□ -1.75
NID1P14543 HDGFP1-201ENST00000405943 252 ntBASIC4.15□□□□□ -1.75
NID1P14543 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.15□□□□□ -1.75
NID1P14543 AC244670.1-201ENST00000436879 112 ntBASIC4.15□□□□□ -1.75
NID1P14543 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.15□□□□□ -1.75
NID1P14543 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.15□□□□□ -1.75
NID1P14543 RNU6-453P-201ENST00000516819 85 ntBASIC4.15□□□□□ -1.75
NID1P14543 RNU2-12P-201ENST00000517216 168 ntBASIC4.15□□□□□ -1.75
NID1P14543 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.15□□□□□ -1.75
NID1P14543 CR383656.8-201ENST00000549046 145 ntBASIC4.15□□□□□ -1.75
NID1P14543 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.15□□□□□ -1.75
NID1P14543 MIR4715-201ENST00000584117 79 ntBASIC4.15□□□□□ -1.75
NID1P14543 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.15□□□□□ -1.75
NID1P14543 IPO5P1-202ENST00000600039 287 ntBASIC4.15□□□□□ -1.75
NID1P14543 AL391813.1-201ENST00000603098 260 ntBASIC4.15□□□□□ -1.75
NID1P14543 AL391903.3-201ENST00000612158 163 ntBASIC4.15□□□□□ -1.75
NID1P14543 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
NID1P14543 AC006065.5-201ENST00000623427 349 ntBASIC4.15□□□□□ -1.75
NID1P14543 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NID1P14543 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NID1P14543 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.15□□□□□ -1.75
NID1P14543 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.15□□□□□ -1.75
NID1P14543 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.14□□□□□ -1.75
NID1P14543 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NID1P14543 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NID1P14543 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NID1P14543 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NID1P14543 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NID1P14543 RNA5SP22-201ENST00000365393 109 ntBASIC4.14□□□□□ -1.75
NID1P14543 RNU6-140P-201ENST00000384566 108 ntBASIC4.14□□□□□ -1.75
NID1P14543 Y_RNA.572-201ENST00000384757 98 ntBASIC4.14□□□□□ -1.75
NID1P14543 RNA5SP89-201ENST00000410300 108 ntBASIC4.14□□□□□ -1.75
NID1P14543 SNORA74C-2-201ENST00000411179 201 ntBASIC4.14□□□□□ -1.75
NID1P14543 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.14□□□□□ -1.75
NID1P14543 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.14□□□□□ -1.75
NID1P14543 RPS12P10-201ENST00000427031 377 ntBASIC4.14□□□□□ -1.75
NID1P14543 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.14□□□□□ -1.75
NID1P14543 RPL23AP93-201ENST00000440847 484 ntBASIC4.14□□□□□ -1.75
NID1P14543 AC009237.8-201ENST00000445492 379 ntBASIC4.14□□□□□ -1.75
NID1P14543 AC012671.1-201ENST00000451912 203 ntBASIC4.14□□□□□ -1.75
NID1P14543 AC007215.1-201ENST00000464893 276 ntBASIC4.14□□□□□ -1.75
NID1P14543 AC010285.1-201ENST00000470580 392 ntBASIC4.14□□□□□ -1.75
NID1P14543 SCARNA8-201ENST00000515924 131 ntBASIC4.14□□□□□ -1.75
NID1P14543 RNU6-844P-201ENST00000517175 102 ntBASIC4.14□□□□□ -1.75
NID1P14543 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.14□□□□□ -1.75
NID1P14543 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.14□□□□□ -1.75
NID1P14543 AL391261.4-201ENST00000616012 481 ntBASIC4.14□□□□□ -1.75
NID1P14543 AL023881.1-201ENST00000621088 301 ntBASIC4.14□□□□□ -1.75
NID1P14543 AC068724.3-201ENST00000625906 87 ntBASIC4.14□□□□□ -1.75
NID1P14543 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.14□□□□□ -1.75
NID1P14543 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NID1P14543 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NID1P14543 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
NID1P14543 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.14□□□□□ -1.75
NID1P14543 AC073073.2-201ENST00000609827 2578 ntBASIC4.13□□□□□ -1.75
NID1P14543 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NID1P14543 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.13□□□□□ -1.75
NID1P14543 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.13□□□□□ -1.75
NID1P14543 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 RNA5SP307-201ENST00000362863 116 ntBASIC4.13□□□□□ -1.75
NID1P14543 RNU6-727P-201ENST00000363592 107 ntBASIC4.13□□□□□ -1.75
NID1P14543 MIR129-1-201ENST00000384972 72 ntBASIC4.13□□□□□ -1.75
NID1P14543 MIR15B-201ENST00000385045 98 ntBASIC4.13□□□□□ -1.75
NID1P14543 AL355497.1-201ENST00000406262 551 ntBASIC4.13□□□□□ -1.75
NID1P14543 RN7SKP167-201ENST00000411047 285 ntBASIC4.13□□□□□ -1.75
NID1P14543 RPL26P27-201ENST00000414397 437 ntBASIC4.13□□□□□ -1.75
NID1P14543 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.13□□□□□ -1.75
NID1P14543 AC004975.1-201ENST00000428733 208 ntBASIC4.13□□□□□ -1.75
NID1P14543 RPL23AP1-201ENST00000428990 471 ntBASIC4.13□□□□□ -1.75
NID1P14543 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.13□□□□□ -1.75
NID1P14543 AC245047.8-201ENST00000456455 284 ntBASIC4.13□□□□□ -1.75
NID1P14543 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.13□□□□□ -1.75
NID1P14543 RNU1-103P-201ENST00000516502 125 ntBASIC4.13□□□□□ -1.75
NID1P14543 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.13□□□□□ -1.75
NID1P14543 AL356575.1-201ENST00000603008 283 ntBASIC4.13□□□□□ -1.75
NID1P14543 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.13□□□□□ -1.75
NID1P14543 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.13□□□□□ -1.75
NID1P14543 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NID1P14543 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 AC068700.1-201ENST00000565862 3754 ntBASIC4.13□□□□□ -1.75
NID1P14543 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NID1P14543 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NID1P14543 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms