Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC010653.1-201ENST00000571108 881 ntBASIC3.29□□□□□ -1.88
RHOP08100 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.29□□□□□ -1.88
RHOP08100 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.29□□□□□ -1.88
RHOP08100 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.29□□□□□ -1.88
RHOP08100 SCARNA4-202ENST00000625402 129 ntBASIC3.29□□□□□ -1.88
RHOP08100 U2.21-201ENST00000637295 81 ntBASIC3.29□□□□□ -1.88
RHOP08100 MIR622-201ENST00000638396 96 ntBASIC3.29□□□□□ -1.88
RHOP08100 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RHOP08100 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RHOP08100 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHOP08100 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
RHOP08100 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.29□□□□□ -1.88
RHOP08100 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RHOP08100 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RHOP08100 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.28□□□□□ -1.88
RHOP08100 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.28□□□□□ -1.88
RHOP08100 RNU6-1309P-201ENST00000363305 108 ntBASIC3.28□□□□□ -1.88
RHOP08100 SNORA71.1-201ENST00000364523 117 ntBASIC3.28□□□□□ -1.88
RHOP08100 RNU6-827P-201ENST00000365553 106 ntBASIC3.28□□□□□ -1.88
RHOP08100 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
RHOP08100 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
RHOP08100 MIR325-201ENST00000385260 98 ntBASIC3.28□□□□□ -1.88
RHOP08100 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.28□□□□□ -1.88
RHOP08100 TMEM167AP1-201ENST00000423409 219 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC093151.1-201ENST00000427711 313 ntBASIC3.28□□□□□ -1.88
RHOP08100 RPL23AP50-201ENST00000434149 455 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC092573.2-201ENST00000434546 243 ntBASIC3.28□□□□□ -1.88
RHOP08100 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.28□□□□□ -1.88
RHOP08100 MTATP6P7-201ENST00000453315 681 ntBASIC3.28□□□□□ -1.88
RHOP08100 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.28□□□□□ -1.88
RHOP08100 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.28□□□□□ -1.88
RHOP08100 U8.21-201ENST00000459536 136 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC128713.1-201ENST00000471495 306 ntBASIC3.28□□□□□ -1.88
RHOP08100 RPL17P19-201ENST00000489069 552 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC015911.1-201ENST00000495111 156 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC022447.4-201ENST00000504053 364 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.28□□□□□ -1.88
RHOP08100 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.28□□□□□ -1.88
RHOP08100 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.28□□□□□ -1.88
RHOP08100 CASP1P1-201ENST00000526345 212 ntBASIC3.28□□□□□ -1.88
RHOP08100 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RHOP08100 HMGB1P14-201ENST00000557424 591 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.28□□□□□ -1.88
RHOP08100 AC008962.1-201ENST00000605729 304 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC005014.2-201ENST00000607795 599 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC005046.1-201ENST00000608515 625 ntBASIC3.28□□□□□ -1.88
RHOP08100 FTX_3.1-201ENST00000610451 147 ntBASIC3.28□□□□□ -1.88
RHOP08100 AC004852.3-201ENST00000614131 326 ntBASIC3.28□□□□□ -1.88
RHOP08100 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.28□□□□□ -1.88
RHOP08100 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.28□□□□□ -1.88
RHOP08100 AL079305.1-201ENST00000623159 3008 ntBASIC3.28□□□□□ -1.88
RHOP08100 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RHOP08100 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RHOP08100 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
RHOP08100 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
RHOP08100 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RHOP08100 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RHOP08100 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RHOP08100 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.27□□□□□ -1.89
RHOP08100 AC005592.1-201ENST00000566527 1640 ntBASIC3.27□□□□□ -1.89
RHOP08100 RPL9P7-201ENST00000330965 580 ntBASIC3.27□□□□□ -1.89
RHOP08100 FTLP6-201ENST00000355274 422 ntBASIC3.27□□□□□ -1.89
RHOP08100 SNORA5B-201ENST00000363786 132 ntBASIC3.27□□□□□ -1.89
RHOP08100 RNU6-1317P-201ENST00000364582 104 ntBASIC3.27□□□□□ -1.89
RHOP08100 RNU6-72P-201ENST00000384285 79 ntBASIC3.27□□□□□ -1.89
RHOP08100 SNORD15B-201ENST00000384714 146 ntBASIC3.27□□□□□ -1.89
RHOP08100 Y_RNA.577-201ENST00000384794 101 ntBASIC3.27□□□□□ -1.89
RHOP08100 MIR184-201ENST00000384962 84 ntBASIC3.27□□□□□ -1.89
RHOP08100 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RHOP08100 RN7SKP220-201ENST00000410611 288 ntBASIC3.27□□□□□ -1.89
RHOP08100 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.27□□□□□ -1.89
RHOP08100 EIF4EP2-201ENST00000422816 654 ntBASIC3.27□□□□□ -1.89
RHOP08100 MTCYBP10-201ENST00000424905 650 ntBASIC3.27□□□□□ -1.89
RHOP08100 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.27□□□□□ -1.89
RHOP08100 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.27□□□□□ -1.89
RHOP08100 AL513043.1-201ENST00000439124 535 ntBASIC3.27□□□□□ -1.89
RHOP08100 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.27□□□□□ -1.89
RHOP08100 BTF3P15-201ENST00000455606 336 ntBASIC3.27□□□□□ -1.89
RHOP08100 RNA5SP310-201ENST00000459084 116 ntBASIC3.27□□□□□ -1.89
RHOP08100 RPL9P9-202ENST00000466501 579 ntBASIC3.27□□□□□ -1.89
RHOP08100 CBX3P8-201ENST00000532412 525 ntBASIC3.27□□□□□ -1.89
RHOP08100 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.27□□□□□ -1.89
RHOP08100 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.27□□□□□ -1.89
RHOP08100 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.27□□□□□ -1.89
RHOP08100 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.27□□□□□ -1.89
RHOP08100 AC092447.9-201ENST00000603395 144 ntBASIC3.27□□□□□ -1.89
RHOP08100 MIR6076-201ENST00000617521 113 ntBASIC3.27□□□□□ -1.89
RHOP08100 AL162373.1-201ENST00000620433 407 ntBASIC3.27□□□□□ -1.89
RHOP08100 7SK.10-201ENST00000621414 298 ntBASIC3.27□□□□□ -1.89
RHOP08100 AC006111.3-201ENST00000622137 383 ntBASIC3.27□□□□□ -1.89
RHOP08100 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.27□□□□□ -1.89
RHOP08100 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
RHOP08100 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RHOP08100 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.26□□□□□ -1.89
RHOP08100 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RHOP08100 RPS29P13-201ENST00000402041 169 ntBASIC3.26□□□□□ -1.89
RHOP08100 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.26□□□□□ -1.89
RHOP08100 RPL26P27-201ENST00000414397 437 ntBASIC3.26□□□□□ -1.89
RHOP08100 MRPS18CP6-201ENST00000423587 223 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms