Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AP002963.1-201ENST00000530590 184 ntBASIC1.9□□□□□ -2.11
RETP07949 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.9□□□□□ -2.11
RETP07949 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.9□□□□□ -2.11
RETP07949 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.9□□□□□ -2.11
RETP07949 AC012213.3-201ENST00000577199 777 ntBASIC1.9□□□□□ -2.11
RETP07949 MIR3913-1-201ENST00000577744 102 ntBASIC1.9□□□□□ -2.11
RETP07949 MIR4765-201ENST00000585007 77 ntBASIC1.9□□□□□ -2.11
RETP07949 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.9□□□□□ -2.11
RETP07949 AC006566.1-201ENST00000608943 513 ntBASIC1.9□□□□□ -2.11
RETP07949 AC072046.2-201ENST00000618366 268 ntBASIC1.9□□□□□ -2.11
RETP07949 AC009509.4-201ENST00000619202 509 ntBASIC1.9□□□□□ -2.11
RETP07949 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
RETP07949 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
RETP07949 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
RETP07949 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RETP07949 Y_RNA.359-201ENST00000365498 102 ntBASIC1.89□□□□□ -2.11
RETP07949 DEFB108C-201ENST00000400154 252 ntBASIC1.89□□□□□ -2.11
RETP07949 AL356432.1-201ENST00000405809 419 ntBASIC1.89□□□□□ -2.11
RETP07949 BTF3L4P1-201ENST00000413813 468 ntBASIC1.89□□□□□ -2.11
RETP07949 CDK8P2-201ENST00000415020 547 ntBASIC1.89□□□□□ -2.11
RETP07949 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.89□□□□□ -2.11
RETP07949 AC114491.1-201ENST00000416095 246 ntBASIC1.89□□□□□ -2.11
RETP07949 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.89□□□□□ -2.11
RETP07949 MTCO2P18-201ENST00000457151 658 ntBASIC1.89□□□□□ -2.11
RETP07949 AC080013.2-201ENST00000460866 323 ntBASIC1.89□□□□□ -2.11
RETP07949 AC068781.1-201ENST00000488231 618 ntBASIC1.89□□□□□ -2.11
RETP07949 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.89□□□□□ -2.11
RETP07949 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.89□□□□□ -2.11
RETP07949 MTCO3P28-201ENST00000513351 515 ntBASIC1.89□□□□□ -2.11
RETP07949 SCARNA24.1-201ENST00000516465 137 ntBASIC1.89□□□□□ -2.11
RETP07949 RNU6-677P-201ENST00000516914 101 ntBASIC1.89□□□□□ -2.11
RETP07949 SNORA31.19-201ENST00000517079 126 ntBASIC1.89□□□□□ -2.11
RETP07949 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.89□□□□□ -2.11
RETP07949 AC084851.1-201ENST00000529105 249 ntBASIC1.89□□□□□ -2.11
RETP07949 OR5B19P-201ENST00000531766 928 ntBASIC1.89□□□□□ -2.11
RETP07949 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
RETP07949 CBX3P7-201ENST00000532876 502 ntBASIC1.89□□□□□ -2.11
RETP07949 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.89□□□□□ -2.11
RETP07949 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
RETP07949 MIR3611-201ENST00000584484 83 ntBASIC1.89□□□□□ -2.11
RETP07949 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
RETP07949 AC174048.1-201ENST00000603389 144 ntBASIC1.89□□□□□ -2.11
RETP07949 AL158032.1-201ENST00000605401 106 ntBASIC1.89□□□□□ -2.11
RETP07949 MIR98-201ENST00000606724 119 ntBASIC1.89□□□□□ -2.11
RETP07949 MIR15A-201ENST00000607334 83 ntBASIC1.89□□□□□ -2.11
RETP07949 AC093783.1-201ENST00000612976 329 ntBASIC1.89□□□□□ -2.11
RETP07949 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RETP07949 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RETP07949 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
RETP07949 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RETP07949 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RETP07949 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RETP07949 Y_RNA.22-201ENST00000362492 102 ntBASIC1.88□□□□□ -2.11
RETP07949 Y_RNA.224-201ENST00000364308 111 ntBASIC1.88□□□□□ -2.11
RETP07949 RNU6-1280P-201ENST00000365211 107 ntBASIC1.88□□□□□ -2.11
RETP07949 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RETP07949 RNU6-641P-201ENST00000384006 107 ntBASIC1.88□□□□□ -2.11
RETP07949 Y_RNA.534-201ENST00000384599 112 ntBASIC1.88□□□□□ -2.11
RETP07949 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RETP07949 RNU2-39P-201ENST00000410604 198 ntBASIC1.88□□□□□ -2.11
RETP07949 AP000275.1-201ENST00000411943 390 ntBASIC1.88□□□□□ -2.11
RETP07949 PIGFP2-201ENST00000421400 651 ntBASIC1.88□□□□□ -2.11
RETP07949 PTGES3P4-201ENST00000426243 356 ntBASIC1.88□□□□□ -2.11
RETP07949 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.88□□□□□ -2.11
RETP07949 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.88□□□□□ -2.11
RETP07949 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.88□□□□□ -2.11
RETP07949 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.88□□□□□ -2.11
RETP07949 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
RETP07949 AC116655.1-201ENST00000508324 901 ntBASIC1.88□□□□□ -2.11
RETP07949 SMURF2P1-201ENST00000514992 481 ntBASIC1.88□□□□□ -2.11
RETP07949 MIR892C-201ENST00000516410 77 ntBASIC1.88□□□□□ -2.11
RETP07949 RNU6-430P-201ENST00000517078 107 ntBASIC1.88□□□□□ -2.11
RETP07949 SNORA31.23-201ENST00000517219 133 ntBASIC1.88□□□□□ -2.11
RETP07949 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
RETP07949 AC090572.1-201ENST00000519251 160 ntBASIC1.88□□□□□ -2.11
RETP07949 FAM92A1P1-201ENST00000528023 890 ntBASIC1.88□□□□□ -2.11
RETP07949 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RETP07949 AC135279.1-201ENST00000543493 504 ntBASIC1.88□□□□□ -2.11
RETP07949 DNAJC19P9-201ENST00000555084 351 ntBASIC1.88□□□□□ -2.11
RETP07949 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.88□□□□□ -2.11
RETP07949 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.88□□□□□ -2.11
RETP07949 MIR4782-201ENST00000577987 79 ntBASIC1.88□□□□□ -2.11
RETP07949 AC098614.4-201ENST00000607601 462 ntBASIC1.88□□□□□ -2.11
RETP07949 uc_338.14-201ENST00000613162 166 ntBASIC1.88□□□□□ -2.11
RETP07949 AC024581.2-201ENST00000619986 252 ntBASIC1.88□□□□□ -2.11
RETP07949 AP003400.5-201ENST00000624827 617 ntBASIC1.88□□□□□ -2.11
RETP07949 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
RETP07949 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RETP07949 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RETP07949 SNORA75B-201ENST00000384053 137 ntBASIC1.87□□□□□ -2.11
RETP07949 RNU6-190P-201ENST00000384154 102 ntBASIC1.87□□□□□ -2.11
RETP07949 U6atac.2-201ENST00000408644 118 ntBASIC1.87□□□□□ -2.11
RETP07949 RNU6-1025P-201ENST00000410629 104 ntBASIC1.87□□□□□ -2.11
RETP07949 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.87□□□□□ -2.11
RETP07949 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.87□□□□□ -2.11
RETP07949 AC133104.1-201ENST00000429100 218 ntBASIC1.87□□□□□ -2.11
RETP07949 RPL23AP30-201ENST00000432419 501 ntBASIC1.87□□□□□ -2.11
RETP07949 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.87□□□□□ -2.11
RETP07949 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.87□□□□□ -2.11
RETP07949 BRK1P2-201ENST00000442875 223 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms