Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC084851.1-201ENST00000529105 249 ntBASIC3.84□□□□□ -1.79
CHGBP05060 MED28P6-201ENST00000558776 231 ntBASIC3.84□□□□□ -1.79
CHGBP05060 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.84□□□□□ -1.79
CHGBP05060 AC091953.5-201ENST00000622919 233 ntBASIC3.84□□□□□ -1.79
CHGBP05060 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHGBP05060 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHGBP05060 MTND5P27-201ENST00000428871 1720 ntBASIC3.84□□□□□ -1.8
CHGBP05060 AC233263.6-201ENST00000631132 1963 ntBASIC3.83□□□□□ -1.8
CHGBP05060 SDAD1P2-201ENST00000441308 2028 ntBASIC3.83□□□□□ -1.8
CHGBP05060 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHGBP05060 Y_RNA.214-201ENST00000364201 112 ntBASIC3.83□□□□□ -1.8
CHGBP05060 DEFB109C-201ENST00000382575 264 ntBASIC3.83□□□□□ -1.8
CHGBP05060 DEFB109B-201ENST00000382656 264 ntBASIC3.83□□□□□ -1.8
CHGBP05060 Y_RNA.483-201ENST00000384380 101 ntBASIC3.83□□□□□ -1.8
CHGBP05060 MIR491-201ENST00000384877 84 ntBASIC3.83□□□□□ -1.8
CHGBP05060 MT-TW-201ENST00000387382 68 ntBASIC3.83□□□□□ -1.8
CHGBP05060 RNA5SP129-201ENST00000410276 118 ntBASIC3.83□□□□□ -1.8
CHGBP05060 RNA5SP31-201ENST00000411144 127 ntBASIC3.83□□□□□ -1.8
CHGBP05060 SNORD56-201ENST00000413522 71 ntBASIC3.83□□□□□ -1.8
CHGBP05060 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.83□□□□□ -1.8
CHGBP05060 AL096701.2-201ENST00000416920 238 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC007560.1-201ENST00000426912 237 ntBASIC3.83□□□□□ -1.8
CHGBP05060 MTND3P9-201ENST00000429526 346 ntBASIC3.83□□□□□ -1.8
CHGBP05060 CST9LP2-201ENST00000437612 320 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.83□□□□□ -1.8
CHGBP05060 AK3P2-201ENST00000507976 429 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.83□□□□□ -1.8
CHGBP05060 Y_RNA.680-201ENST00000516441 93 ntBASIC3.83□□□□□ -1.8
CHGBP05060 RNU6-570P-201ENST00000517051 105 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.83□□□□□ -1.8
CHGBP05060 AC144568.1-201ENST00000520139 137 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC025755.1-201ENST00000521306 278 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC104027.1-201ENST00000521887 300 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.83□□□□□ -1.8
CHGBP05060 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.83□□□□□ -1.8
CHGBP05060 AC090517.1-201ENST00000569307 266 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.83□□□□□ -1.8
CHGBP05060 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.83□□□□□ -1.8
CHGBP05060 AC018692.3-201ENST00000623929 123 ntBASIC3.83□□□□□ -1.8
CHGBP05060 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.83□□□□□ -1.8
CHGBP05060 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHGBP05060 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
CHGBP05060 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHGBP05060 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.83□□□□□ -1.8
CHGBP05060 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.83□□□□□ -1.8
CHGBP05060 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
CHGBP05060 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHGBP05060 AC010615.1-201ENST00000594254 1764 ntBASIC3.82□□□□□ -1.8
CHGBP05060 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHGBP05060 MIR412-201ENST00000362142 91 ntBASIC3.82□□□□□ -1.8
CHGBP05060 Y_RNA.19-201ENST00000362462 99 ntBASIC3.82□□□□□ -1.8
CHGBP05060 RNU6-472P-201ENST00000384299 107 ntBASIC3.82□□□□□ -1.8
CHGBP05060 MIR128-1-201ENST00000384921 82 ntBASIC3.82□□□□□ -1.8
CHGBP05060 SNORD67-201ENST00000390833 111 ntBASIC3.82□□□□□ -1.8
CHGBP05060 RNU2-38P-201ENST00000410856 79 ntBASIC3.82□□□□□ -1.8
CHGBP05060 RPL27AP8-201ENST00000424277 446 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.82□□□□□ -1.8
CHGBP05060 ARL5AP4-201ENST00000430731 512 ntBASIC3.82□□□□□ -1.8
CHGBP05060 PIGFP3-201ENST00000441918 722 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.82□□□□□ -1.8
CHGBP05060 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.82□□□□□ -1.8
CHGBP05060 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.82□□□□□ -1.8
CHGBP05060 RNU6-1132P-201ENST00000459214 107 ntBASIC3.82□□□□□ -1.8
CHGBP05060 RN7SL807P-201ENST00000470923 297 ntBASIC3.82□□□□□ -1.8
CHGBP05060 RPL23AP45-201ENST00000476406 468 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.82□□□□□ -1.8
CHGBP05060 AL359273.1-201ENST00000510918 627 ntBASIC3.82□□□□□ -1.8
CHGBP05060 RNA5SP468-201ENST00000516782 93 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.82□□□□□ -1.8
CHGBP05060 MIR5004-201ENST00000579078 107 ntBASIC3.82□□□□□ -1.8
CHGBP05060 VN1R91P-201ENST00000594377 169 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AC008121.1-201ENST00000603244 268 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AC004852.3-201ENST00000614131 326 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AL355810.1-201ENST00000614629 552 ntBASIC3.82□□□□□ -1.8
CHGBP05060 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.82□□□□□ -1.8
CHGBP05060 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.82□□□□□ -1.8
CHGBP05060 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHGBP05060 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.82□□□□□ -1.8
CHGBP05060 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHGBP05060 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
CHGBP05060 SNORD14B-201ENST00000364533 90 ntBASIC3.81□□□□□ -1.8
CHGBP05060 Y_RNA.376-201ENST00000365638 108 ntBASIC3.81□□□□□ -1.8
CHGBP05060 RNU6-708P-201ENST00000384217 107 ntBASIC3.81□□□□□ -1.8
CHGBP05060 RNU6-700P-201ENST00000391043 107 ntBASIC3.81□□□□□ -1.8
CHGBP05060 AL591034.2-201ENST00000402839 359 ntBASIC3.81□□□□□ -1.8
CHGBP05060 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
CHGBP05060 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.81□□□□□ -1.8
CHGBP05060 YPEL5P1-201ENST00000419731 367 ntBASIC3.81□□□□□ -1.8
CHGBP05060 AC007098.1-201ENST00000420122 367 ntBASIC3.81□□□□□ -1.8
CHGBP05060 RPL37P4-201ENST00000448908 268 ntBASIC3.81□□□□□ -1.8
CHGBP05060 HMGB3P8-201ENST00000449709 577 ntBASIC3.81□□□□□ -1.8
CHGBP05060 U8.21-201ENST00000459536 136 ntBASIC3.81□□□□□ -1.8
CHGBP05060 KC877373.1-201ENST00000479066 408 ntBASIC3.81□□□□□ -1.8
CHGBP05060 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.81□□□□□ -1.8
CHGBP05060 AL160314.1-201ENST00000490836 438 ntBASIC3.81□□□□□ -1.8
CHGBP05060 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.81□□□□□ -1.8
CHGBP05060 RNU6-408P-201ENST00000515910 100 ntBASIC3.81□□□□□ -1.8
CHGBP05060 RNU2-53P-201ENST00000516257 147 ntBASIC3.81□□□□□ -1.8
CHGBP05060 SCARNA15.2-201ENST00000516409 127 ntBASIC3.81□□□□□ -1.8
CHGBP05060 SNORA70.24-201ENST00000517233 118 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms