Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 RNU6-181P-201ENST00000363225 107 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 RNA5SP240-201ENST00000365355 128 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 RNU6-1029P-201ENST00000384109 107 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC019129.1-201ENST00000403786 261 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 RNA5SP270-201ENST00000411361 118 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 MTCO2P34-201ENST00000421994 607 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AL358934.1-201ENST00000432346 324 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AL513124.1-201ENST00000450410 614 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC012308.1-201ENST00000451232 178 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 MTCO2P6-201ENST00000463134 685 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 UBL5P3-201ENST00000475112 231 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AL121594.1-201ENST00000475906 575 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 MTCYBP40-201ENST00000509390 1135 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 RNU6-1178P-201ENST00000516674 107 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 RNU6-445P-201ENST00000516949 107 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC107953.1-201ENST00000522216 297 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC007834.2-201ENST00000536310 343 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 IMMP1LP2-201ENST00000552954 492 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC040904.1-201ENST00000590850 223 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC006566.1-201ENST00000608943 513 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC073114.1-201ENST00000612027 490 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC136475.10-201ENST00000620253 385 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 AC097372.5-201ENST00000623665 376 ntBASIC1.61□□□□□ -2.15
HLA-DPB1P04440 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU6-1097P-201ENST00000363586 107 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU6-234P-201ENST00000365229 104 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU6-348P-201ENST00000384386 107 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU6-456P-201ENST00000384493 107 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU6-1274P-201ENST00000384557 107 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU2-23P-201ENST00000410545 195 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU2-48P-201ENST00000410694 191 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AL356379.1-201ENST00000414105 126 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC133104.1-201ENST00000429100 218 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 USP9YP29-201ENST00000445112 563 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AL353752.1-201ENST00000454946 260 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC055731.1-201ENST00000474387 401 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RPL30P12-201ENST00000474666 353 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 RNU6-586P-201ENST00000517265 104 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC034114.1-201ENST00000520293 285 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC110588.1-201ENST00000559699 137 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 MIR3126-201ENST00000577443 74 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC121247.2-201ENST00000604776 136 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC009318.2-201ENST00000610917 651 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 AC099842.1-201ENST00000619919 596 ntBASIC1.6□□□□□ -2.15
HLA-DPB1P04440 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DPB1P04440 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HLA-DPB1P04440 RNU6-212P-201ENST00000362642 104 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 RNU6-655P-201ENST00000362858 107 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 RNU2-9P-201ENST00000410194 145 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AL365400.1-201ENST00000431854 640 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AL596276.1-201ENST00000434465 418 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 KATNBL1P3-201ENST00000443475 909 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 RNU7-182P-201ENST00000459009 62 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC074344.1-201ENST00000512823 224 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DPB1P04440 RNA5SP503-201ENST00000517047 117 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC109329.1-201ENST00000518744 317 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.59□□□□□ -2.15
HLA-DPB1P04440 OSBPL9P5-201ENST00000542581 171 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC027807.1-201ENST00000559921 996 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 MIR4703-201ENST00000577728 79 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC078795.2-201ENST00000602835 1252 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 ELOCP5-201ENST00000604924 333 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 Z82243.1-201ENST00000609432 473 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC008121.3-201ENST00000618726 433 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 AC090517.3-201ENST00000625170 141 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 SEPT14P19-203ENST00000633205 211 ntBASIC1.59□□□□□ -2.15
HLA-DPB1P04440 RNU6-944P-201ENST00000364023 107 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 RNU5E-7P-201ENST00000365290 117 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 RNU4-48P-201ENST00000365559 182 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 SNORD116-8-201ENST00000384365 95 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 MIR17-201ENST00000385012 84 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 MIR561-201ENST00000385216 97 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms