Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A1P02462 SCARNA11.3-201ENST00000517276 130 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC022880.1-201ENST00000534017 973 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A1P02462 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A1P02462 AC012213.3-201ENST00000577199 777 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 MIR1273G-201ENST00000577677 100 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 MIR1273C-201ENST00000578669 77 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC105245.1-201ENST00000581934 244 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL4A1P02462 AL512605.2-201ENST00000592972 256 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AL358072.1-201ENST00000604156 575 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC005034.5-201ENST00000604219 466 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 MIR15A-201ENST00000607334 83 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AL050303.3-201ENST00000613704 284 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COL4A1P02462 FRG1KP-201ENST00000623592 341 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC022513.1-201ENST00000624512 117 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC008555.8-201ENST00000623602 2168 ntBASIC1.08□□□□□ -2.24
COL4A1P02462 AC073343.1-201ENST00000328239 651 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 Y_RNA.18-201ENST00000362461 102 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RNU6-188P-201ENST00000364207 107 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MIR147B-201ENST00000390185 80 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RNU6-220P-201ENST00000390919 107 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL359634.1-202ENST00000404721 284 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 U6atac.2-201ENST00000408644 118 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RNU2-39P-201ENST00000410604 198 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL356583.2-201ENST00000426536 280 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A1P02462 NEFMP1-201ENST00000443423 1006 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL357134.1-201ENST00000445848 426 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL121769.1-201ENST00000469473 401 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MTND1P3-201ENST00000484956 952 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RPS27AP10-201ENST00000496103 208 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AP001372.4-201ENST00000524889 472 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A1P02462 ROCK1P1-201ENST00000573767 549 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MIR4782-201ENST00000577987 79 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A1P02462 AL391813.1-201ENST00000603098 260 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL161798.1-201ENST00000604630 131 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC034229.4-201ENST00000607861 441 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A1P02462 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC007490.1-201ENST00000624321 703 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC010329.5-201ENST00000623497 2174 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RNU5A-2P-201ENST00000384337 116 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MIR150-201ENST00000385048 84 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 Y_RNA.598-201ENST00000410480 95 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC096649.2-201ENST00000416186 393 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 CYCSP48-201ENST00000417124 323 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC009518.2-201ENST00000418056 731 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RPS27AP14-201ENST00000422868 454 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC004941.2-201ENST00000427009 228 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A1P02462 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A1P02462 AL365184.2-201ENST00000431139 435 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A1P02462 RPL36AP53-201ENST00000432891 316 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RPL22P17-201ENST00000438729 315 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RPS15AP9-201ENST00000439856 381 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A1P02462 AL606517.1-201ENST00000446914 387 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 FABP5P15-201ENST00000453566 214 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A1P02462 RPL23AP3-201ENST00000453844 468 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RPL37P6-201ENST00000460682 294 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 DYNLL1P5-201ENST00000467158 270 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A1P02462 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A1P02462 RNU6-678P-201ENST00000516832 109 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 RNU6-1183P-201ENST00000517054 60 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC109329.1-201ENST00000518744 317 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC009902.1-201ENST00000519351 183 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MTND4LP18-201ENST00000526864 291 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A1P02462 AC012435.1-202ENST00000568772 240 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MIR4765-201ENST00000585007 77 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AC022893.3-201ENST00000607665 437 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 MTND5P42-201ENST00000637720 498 ntBASIC1.07□□□□□ -2.24
COL4A1P02462 AL359854.1-201ENST00000614203 1594 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL4A1P02462 RNU6-942P-201ENST00000363002 107 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 RNU6-371P-201ENST00000364283 108 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 RNA5SP240-201ENST00000365355 128 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 RNU6-898P-201ENST00000365627 104 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 RNU6-946P-201ENST00000383878 107 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL4A1P02462 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL4A1P02462 MRPL42P2-201ENST00000403169 426 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 FTH1P15-201ENST00000406984 280 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 Z99497.1-201ENST00000421282 135 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 AC104651.1-201ENST00000427559 735 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.06□□□□□ -2.24
COL4A1P02462 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A1P02462 AL353689.1-201ENST00000438895 199 ntBASIC1.06□□□□□ -2.24
COL4A1P02462 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A1P02462 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms