Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC092447.10-201ENST00000620607 1652 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 RNU6-222P-201ENST00000362438 107 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 SNORD14D-201ENST00000384390 87 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 RNU6-278P-201ENST00000390945 109 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.79□□□□□ -2.28
COL1A1P02452 MTCO2P1-201ENST00000424648 477 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AC004854.1-201ENST00000440356 349 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 MTCO1P44-201ENST00000441935 243 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 MTATP6P30-201ENST00000443540 664 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 RPL39P29-201ENST00000447779 157 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.79□□□□□ -2.28
COL1A1P02452 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.79□□□□□ -2.28
COL1A1P02452 RPL30P7-201ENST00000479312 323 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 RNU6-1183P-201ENST00000517054 60 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 ACA59.2-201ENST00000517061 156 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 OR8K2P-201ENST00000524645 927 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.79□□□□□ -2.28
COL1A1P02452 AP003034.1-201ENST00000534621 422 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 RAB11AP2-201ENST00000545905 639 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.79□□□□□ -2.28
COL1A1P02452 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.79□□□□□ -2.28
COL1A1P02452 MIR4782-201ENST00000577987 79 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.79□□□□□ -2.28
COL1A1P02452 RPL30P11-203ENST00000598995 310 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AC006927.2-201ENST00000639256 389 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 AL163152.1-201ENST00000642001 374 ntBASIC0.79□□□□□ -2.28
COL1A1P02452 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
COL1A1P02452 SNORD114-19-201ENST00000363072 75 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 Y_RNA.518-201ENST00000384552 113 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.78□□□□□ -2.28
COL1A1P02452 AC104651.1-201ENST00000427559 735 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.78□□□□□ -2.28
COL1A1P02452 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.78□□□□□ -2.28
COL1A1P02452 RPS20P10-201ENST00000451209 253 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 RPS26P55-201ENST00000471178 356 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.78□□□□□ -2.28
COL1A1P02452 RPF2P2-201ENST00000504693 896 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
COL1A1P02452 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.78□□□□□ -2.28
COL1A1P02452 DEFB131D-201ENST00000526803 184 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.78□□□□□ -2.28
COL1A1P02452 AC104072.1-201ENST00000568817 668 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.78□□□□□ -2.28
COL1A1P02452 MIR6134-201ENST00000617606 109 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
COL1A1P02452 AC243829.3-201ENST00000622177 108 ntBASIC0.78□□□□□ -2.28
COL1A1P02452 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.29
COL1A1P02452 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
COL1A1P02452 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL1A1P02452 AC073544.1-201ENST00000600110 1595 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
COL1A1P02452 RNU5B-4P-201ENST00000363508 111 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 RNU6-288P-201ENST00000363690 104 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 RNU6-1164P-201ENST00000364428 107 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 SNORD1A-201ENST00000364968 72 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AC068533.2-201ENST00000411872 306 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.77□□□□□ -2.29
COL1A1P02452 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.77□□□□□ -2.29
COL1A1P02452 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.77□□□□□ -2.29
COL1A1P02452 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.77□□□□□ -2.29
COL1A1P02452 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.77□□□□□ -2.29
COL1A1P02452 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.77□□□□□ -2.29
COL1A1P02452 AC024589.1-201ENST00000512207 263 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.77□□□□□ -2.29
COL1A1P02452 AP003484.1-201ENST00000530974 250 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AC023538.1-201ENST00000534576 736 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AC087897.1-201ENST00000550134 156 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AC060771.1-201ENST00000582031 164 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AC073544.2-201ENST00000601155 540 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 BNIP3P9-201ENST00000603714 553 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AL354696.1-201ENST00000614652 497 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 AL078604.3-201ENST00000615580 211 ntBASIC0.77□□□□□ -2.29
COL1A1P02452 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.77□□□□□ -2.29
COL1A1P02452 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.76□□□□□ -2.29
COL1A1P02452 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COL1A1P02452 Y_RNA.167-201ENST00000363735 109 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 RNU6-1187P-201ENST00000364771 110 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 Y_RNA.303-201ENST00000364998 94 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 RNU6-744P-201ENST00000365557 107 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 RNU6-546P-201ENST00000383991 107 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 RNU6-1316P-201ENST00000384242 108 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 SNORA48.1-201ENST00000390879 135 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AL603865.2-201ENST00000401679 213 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 USP9YP18-201ENST00000425912 695 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.76□□□□□ -2.29
COL1A1P02452 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.76□□□□□ -2.29
COL1A1P02452 USP9YP17-201ENST00000444617 696 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.76□□□□□ -2.29
COL1A1P02452 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.76□□□□□ -2.29
COL1A1P02452 BTF3P15-201ENST00000455606 336 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 RNU7-59P-201ENST00000459101 61 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 RNA5SP285-201ENST00000516619 119 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AC109329.1-201ENST00000518744 317 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AC021451.1-201ENST00000523498 1129 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 APOOP3-201ENST00000536787 586 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AL132657.2-201ENST00000564417 358 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AL512347.1-201ENST00000566420 503 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AC126365.2-201ENST00000580630 379 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AC107952.2-201ENST00000606048 486 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms