Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.27□□□□□ -1.89
SCAF4O95104 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCAF4O95104 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.27□□□□□ -1.89
SCAF4O95104 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.27□□□□□ -1.89
SCAF4O95104 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCAF4O95104 MAPK10-322ENST00000641485 4530 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAF4O95104 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCAF4O95104 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SCAF4O95104 AC009541.1-201ENST00000438279 2662 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNU6-222P-201ENST00000362438 107 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNU6-200P-201ENST00000364743 107 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNA5SP479-201ENST00000364858 117 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNU1-73P-201ENST00000383971 164 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 Y_RNA.439-201ENST00000384119 94 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNU6-17P-201ENST00000384245 107 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNU6-18P-201ENST00000384527 107 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SCAF4O95104 SNORD58.1-201ENST00000391313 66 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 AL079342.1-201ENST00000401460 267 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 MRPL35P1-201ENST00000404272 572 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.26□□□□□ -1.89
SCAF4O95104 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.26□□□□□ -1.89
SCAF4O95104 AP000907.1-201ENST00000428428 510 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 SUMO1P2-201ENST00000452524 304 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNA5SP246-201ENST00000458909 119 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 MIR2355-201ENST00000517199 87 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.26□□□□□ -1.89
SCAF4O95104 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.26□□□□□ -1.89
SCAF4O95104 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAF4O95104 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 AC114781.5-201ENST00000615297 108 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 MIR376A1-201ENST00000616574 68 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAF4O95104 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAF4O95104 AC233981.2-201ENST00000611524 1614 ntBASIC3.26□□□□□ -1.89
SCAF4O95104 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SCAF4O95104 SRP72P2-201ENST00000344851 1979 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCAF4O95104 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.25□□□□□ -1.89
SCAF4O95104 RNU6-1301P-201ENST00000362724 104 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RNU6-527P-201ENST00000363425 104 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 Y_RNA.143-201ENST00000363520 106 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 SNORD27-201ENST00000363981 72 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 SNORD32A-201ENST00000364805 84 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RNU6-1286P-201ENST00000383871 107 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RNU6-338P-201ENST00000383888 105 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RNA5SP213-201ENST00000391031 106 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RPS4XP3-201ENST00000398541 413 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 MIR548H3-201ENST00000408771 118 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 AC096920.1-201ENST00000423991 241 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 AC009296.1-201ENST00000443146 155 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RPL32P34-201ENST00000486380 400 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 AF186996.7-201ENST00000492781 209 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RPL23AP49-201ENST00000492925 468 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RN7SL691P-201ENST00000494487 301 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 SNORA31.9-201ENST00000516429 84 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 RN7SKP209-201ENST00000516888 304 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 TRAV8-5-201ENST00000537369 341 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 AC093023.1-201ENST00000547375 507 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 AC020895.1-201ENST00000595362 272 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 AC009779.6-201ENST00000603972 165 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.25□□□□□ -1.89
SCAF4O95104 AC240442.1-201ENST00000616055 283 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 MIR6134-201ENST00000617606 109 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 AC007656.2-201ENST00000624902 4547 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SCAF4O95104 LINC02555-201ENST00000563933 1951 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.25□□□□□ -1.89
SCAF4O95104 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCAF4O95104 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
SCAF4O95104 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.24□□□□□ -1.89
SCAF4O95104 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.24□□□□□ -1.89
SCAF4O95104 AC022336.2-201ENST00000568966 2538 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 AC058791.1-201ENST00000608412 3198 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 Y_RNA.16-201ENST00000362421 102 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 SNORD35B-201ENST00000363660 87 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RNU6-968P-201ENST00000384076 107 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RAB9AP3-201ENST00000412737 573 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RPL26P27-201ENST00000414397 437 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.24□□□□□ -1.89
SCAF4O95104 HMGB1P37-201ENST00000439613 609 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RAB9AP1-201ENST00000449393 573 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 AP002884.2-201ENST00000471647 395 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RPS26P21-201ENST00000475397 348 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RPL30P14-201ENST00000482744 348 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RPS23P5-201ENST00000495419 428 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 RNA5SP519-201ENST00000516480 119 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 DEFB108E-201ENST00000524692 240 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCAF4O95104 AC023824.2-201ENST00000566185 400 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 MIR3939-201ENST00000582614 106 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 AL138880.2-201ENST00000616214 239 ntBASIC3.24□□□□□ -1.89
SCAF4O95104 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms