Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF40AO75400 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF40AO75400 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PRPF40AO75400 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF40AO75400 Y_RNA.396-201ENST00000383949 103 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 RNU6-198P-201ENST00000384258 104 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 RNU6-843P-201ENST00000384454 104 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AP000567.1-201ENST00000406413 156 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AP000907.1-201ENST00000428428 510 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF40AO75400 RPEP5-201ENST00000441137 268 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 GPM6BP3-201ENST00000442797 145 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AC087477.1-201ENST00000465747 340 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AP002884.2-201ENST00000471647 395 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 RN7SL283P-201ENST00000489055 303 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AC016632.1-201ENST00000503994 196 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AC026784.1-201ENST00000507986 352 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF40AO75400 AC016256.1-201ENST00000547971 354 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.31□□□□□ -1.72
PRPF40AO75400 MIR4425-201ENST00000580572 84 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF40AO75400 AC006111.3-201ENST00000622137 383 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 MIR6500-201ENST00000622700 86 ntBASIC4.31□□□□□ -1.72
PRPF40AO75400 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF40AO75400 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF40AO75400 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40AO75400 SNORD115-32-201ENST00000364079 82 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 RNU6-1141P-201ENST00000364520 107 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 RNU6-1318P-201ENST00000365389 103 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 SNORA29-201ENST00000384183 140 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 MIR153-2-201ENST00000385225 87 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 UBA52P6-201ENST00000399822 382 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 RNA5SP38-201ENST00000410750 119 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF40AO75400 RPL23AP22-201ENST00000437556 453 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF40AO75400 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF40AO75400 AC107626.1-201ENST00000471084 183 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 RNU6-1231P-201ENST00000517185 103 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 CKS1BP7-201ENST00000522230 235 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF40AO75400 AC120057.2-201ENST00000571520 271 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF40AO75400 RMST_8.1-201ENST00000610287 165 ntBASIC4.3□□□□□ -1.72
PRPF40AO75400 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40AO75400 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40AO75400 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF40AO75400 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40AO75400 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PRPF40AO75400 Y_RNA.222-201ENST00000364264 102 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 SNORD6-201ENST00000365444 73 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 RNU6-17P-201ENST00000384245 107 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 RNU6-18P-201ENST00000384527 107 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 MIR134-201ENST00000385258 73 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 SDAD1P3-201ENST00000427380 333 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 RPS29P7-201ENST00000439662 171 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 SSXP4-201ENST00000451349 245 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 CEACAMP4-201ENST00000457676 421 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 SNRPGP3-201ENST00000469405 227 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 AF186996.7-201ENST00000492781 209 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 AC022868.1-201ENST00000517767 391 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 AC008011.1-201ENST00000545989 227 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF40AO75400 MIR1254-2-201ENST00000579553 63 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 AL355877.2-201ENST00000603670 358 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF40AO75400 AC012531.5-201ENST00000611375 151 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 AC137590.2-201ENST00000619709 240 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 RBBP8P1-201ENST00000449447 1844 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF40AO75400 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF40AO75400 ZNF826P-207ENST00000622273 1910 ntBASIC4.29□□□□□ -1.72
PRPF40AO75400 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF40AO75400 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PRPF40AO75400 RNU6-222P-201ENST00000362438 107 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 Y_RNA.64-201ENST00000362845 102 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 Y_RNA.183-201ENST00000363882 113 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RNU6-487P-201ENST00000365430 104 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RNU6-611P-201ENST00000384276 104 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RNY3P4-201ENST00000384428 101 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RNU6-541P-201ENST00000384709 110 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 MTHFD2P2-201ENST00000407725 247 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RNA5SP390-201ENST00000410191 113 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 AC091286.1-201ENST00000431233 461 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 AL714022.1-201ENST00000439897 151 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RPL39P29-201ENST00000447779 157 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RNU7-23P-201ENST00000459465 62 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RN7SL132P-201ENST00000478131 296 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RPS4XP22-201ENST00000480755 780 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF40AO75400 Y_RNA.713-201ENST00000517013 96 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF40AO75400 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF40AO75400 AP002770.2-201ENST00000543613 532 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF40AO75400 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF40AO75400 SNORA43.4-201ENST00000629559 138 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 U6.92-201ENST00000636464 89 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms