Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF40O75150 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF40O75150 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF40O75150 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF40O75150 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RNF40O75150 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF40O75150 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF40O75150 SMG1P6-201ENST00000532337 2930 ntBASIC5.1□□□□□ -1.59
RNF40O75150 AC106871.1-201ENST00000568324 3102 ntBASIC5.1□□□□□ -1.59
RNF40O75150 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF40O75150 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF40O75150 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF40O75150 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF40O75150 SNORD45.3-201ENST00000363836 72 ntBASIC5.1□□□□□ -1.59
RNF40O75150 Y_RNA.341-201ENST00000365341 102 ntBASIC5.1□□□□□ -1.59
RNF40O75150 Y_RNA.348-201ENST00000365403 103 ntBASIC5.1□□□□□ -1.59
RNF40O75150 RNU6-140P-201ENST00000384566 108 ntBASIC5.1□□□□□ -1.59
RNF40O75150 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF40O75150 MIR1278-201ENST00000408753 81 ntBASIC5.1□□□□□ -1.59
RNF40O75150 RN7SKP100-201ENST00000411258 284 ntBASIC5.1□□□□□ -1.59
RNF40O75150 AL450023.3-201ENST00000440592 271 ntBASIC5.1□□□□□ -1.59
RNF40O75150 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF40O75150 RPL26P9-201ENST00000457466 433 ntBASIC5.1□□□□□ -1.59
RNF40O75150 RN7SL385P-201ENST00000468873 276 ntBASIC5.1□□□□□ -1.59
RNF40O75150 NIP7P2-201ENST00000485801 544 ntBASIC5.1□□□□□ -1.59
RNF40O75150 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.1□□□□□ -1.59
RNF40O75150 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
RNF40O75150 RNU6-1061P-201ENST00000516530 99 ntBASIC5.1□□□□□ -1.59
RNF40O75150 RNA5SP360-201ENST00000516555 118 ntBASIC5.1□□□□□ -1.59
RNF40O75150 IGKV1-32-201ENST00000519290 311 ntBASIC5.1□□□□□ -1.59
RNF40O75150 A2MP1-204ENST00000566278 4130 ntBASIC5.1□□□□□ -1.59
RNF40O75150 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF40O75150 MIR6758-201ENST00000620653 63 ntBASIC5.1□□□□□ -1.59
RNF40O75150 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF40O75150 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF40O75150 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF40O75150 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNF40O75150 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF40O75150 AC138915.1-201ENST00000565427 1685 ntBASIC5.09□□□□□ -1.59
RNF40O75150 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF40O75150 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF40O75150 SNORA73.1-201ENST00000363107 205 ntBASIC5.09□□□□□ -1.59
RNF40O75150 RNU6-1336P-201ENST00000383886 109 ntBASIC5.09□□□□□ -1.59
RNF40O75150 RNU6-144P-201ENST00000383951 107 ntBASIC5.09□□□□□ -1.59
RNF40O75150 RNU6-106P-201ENST00000384405 107 ntBASIC5.09□□□□□ -1.59
RNF40O75150 SNORA26.2-201ENST00000390922 122 ntBASIC5.09□□□□□ -1.59
RNF40O75150 SNORA68.2-201ENST00000391263 128 ntBASIC5.09□□□□□ -1.59
RNF40O75150 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF40O75150 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF40O75150 RN7SKP276-201ENST00000516242 268 ntBASIC5.09□□□□□ -1.59
RNF40O75150 RNU6-762P-201ENST00000517107 102 ntBASIC5.09□□□□□ -1.59
RNF40O75150 AP001880.2-201ENST00000538233 448 ntBASIC5.09□□□□□ -1.59
RNF40O75150 AC091178.2-201ENST00000584401 117 ntBASIC5.09□□□□□ -1.59
RNF40O75150 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF40O75150 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.09□□□□□ -1.59
RNF40O75150 SNX18P1Y-201ENST00000616231 511 ntBASIC5.09□□□□□ -1.59
RNF40O75150 AC106754.2-201ENST00000623006 233 ntBASIC5.09□□□□□ -1.59
RNF40O75150 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF40O75150 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
RNF40O75150 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF40O75150 Z82209.1-201ENST00000422141 2135 ntBASIC5.09□□□□□ -1.59
RNF40O75150 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.09□□□□□ -1.6
RNF40O75150 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF40O75150 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RNF40O75150 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF40O75150 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF40O75150 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RNF40O75150 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF40O75150 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF40O75150 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RNF40O75150 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
RNF40O75150 MIR367-201ENST00000362299 68 ntBASIC5.08□□□□□ -1.6
RNF40O75150 RNA5SP332-201ENST00000391063 115 ntBASIC5.08□□□□□ -1.6
RNF40O75150 SNORA77-201ENST00000408716 125 ntBASIC5.08□□□□□ -1.6
RNF40O75150 MLLT10P1-201ENST00000418346 262 ntBASIC5.08□□□□□ -1.6
RNF40O75150 AC245047.4-201ENST00000433189 144 ntBASIC5.08□□□□□ -1.6
RNF40O75150 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RNF40O75150 AC125238.1-201ENST00000448842 249 ntBASIC5.08□□□□□ -1.6
RNF40O75150 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF40O75150 AC103975.1-201ENST00000482506 483 ntBASIC5.08□□□□□ -1.6
RNF40O75150 AC108145.1-201ENST00000503770 153 ntBASIC5.08□□□□□ -1.6
RNF40O75150 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF40O75150 FTX_3.1-201ENST00000610451 147 ntBASIC5.08□□□□□ -1.6
RNF40O75150 AC099778.2-201ENST00000610904 211 ntBASIC5.08□□□□□ -1.6
RNF40O75150 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF40O75150 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF40O75150 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF40O75150 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF40O75150 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF40O75150 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF40O75150 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF40O75150 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 RNU6-978P-201ENST00000364371 103 ntBASIC5.07□□□□□ -1.6
RNF40O75150 RNU1-64P-201ENST00000365443 163 ntBASIC5.07□□□□□ -1.6
RNF40O75150 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF40O75150 RNU1-73P-201ENST00000383971 164 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms