Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC105245.1-201ENST00000581934 244 ntBASIC2.36□□□□□ -2.03
SNX3O60493 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.36□□□□□ -2.03
SNX3O60493 AC069294.1-201ENST00000608397 350 ntBASIC2.36□□□□□ -2.03
SNX3O60493 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.36□□□□□ -2.03
SNX3O60493 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNX3O60493 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNX3O60493 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SNX3O60493 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNX3O60493 RNU6-1010P-201ENST00000362757 107 ntBASIC2.35□□□□□ -2.03
SNX3O60493 RNU6-336P-201ENST00000364891 107 ntBASIC2.35□□□□□ -2.03
SNX3O60493 Y_RNA.295-201ENST00000364918 102 ntBASIC2.35□□□□□ -2.03
SNX3O60493 RNU6-827P-201ENST00000365553 106 ntBASIC2.35□□□□□ -2.03
SNX3O60493 SNORD73A-201ENST00000386062 65 ntBASIC2.35□□□□□ -2.03
SNX3O60493 RNU6-332P-201ENST00000391193 108 ntBASIC2.35□□□□□ -2.03
SNX3O60493 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNX3O60493 RNA5SP390-201ENST00000410191 113 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AL117339.3-201ENST00000418733 162 ntBASIC2.35□□□□□ -2.03
SNX3O60493 SNRPEP10-201ENST00000420249 274 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX3O60493 EIF1P1-201ENST00000421436 341 ntBASIC2.35□□□□□ -2.03
SNX3O60493 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX3O60493 MRPS10P2-201ENST00000431226 381 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.35□□□□□ -2.03
SNX3O60493 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNX3O60493 AC007969.2-201ENST00000441891 191 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AC104389.3-201ENST00000445629 235 ntBASIC2.35□□□□□ -2.03
SNX3O60493 RPL7P12-201ENST00000446719 750 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AC013470.1-201ENST00000453438 462 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX3O60493 RPL7P49-201ENST00000471402 708 ntBASIC2.35□□□□□ -2.03
SNX3O60493 RPL30P12-201ENST00000474666 353 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AC090096.1-201ENST00000489168 390 ntBASIC2.35□□□□□ -2.03
SNX3O60493 SNORA19.2-201ENST00000516013 114 ntBASIC2.35□□□□□ -2.03
SNX3O60493 Y_RNA.665-201ENST00000516177 98 ntBASIC2.35□□□□□ -2.03
SNX3O60493 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
SNX3O60493 COPS8P3-201ENST00000526024 482 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX3O60493 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.35□□□□□ -2.03
SNX3O60493 MIR5692C1-201ENST00000585309 91 ntBASIC2.35□□□□□ -2.03
SNX3O60493 BNIP3P25-201ENST00000596023 559 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AL357078.3-201ENST00000607528 618 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AL160394.1-201ENST00000624765 724 ntBASIC2.35□□□□□ -2.03
SNX3O60493 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
SNX3O60493 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNX3O60493 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.34□□□□□ -2.03
SNX3O60493 OR56A5-201ENST00000340110 738 ntBASIC2.34□□□□□ -2.03
SNX3O60493 RNU1-72P-201ENST00000362976 153 ntBASIC2.34□□□□□ -2.03
SNX3O60493 RNU6-529P-201ENST00000363383 104 ntBASIC2.34□□□□□ -2.03
SNX3O60493 Y_RNA.373-201ENST00000365600 103 ntBASIC2.34□□□□□ -2.03
SNX3O60493 RNU6-877P-201ENST00000383868 107 ntBASIC2.34□□□□□ -2.03
SNX3O60493 SNORA51.11-201ENST00000384442 131 ntBASIC2.34□□□□□ -2.03
SNX3O60493 Y_RNA.573-201ENST00000384763 105 ntBASIC2.34□□□□□ -2.03
SNX3O60493 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.34□□□□□ -2.03
SNX3O60493 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.34□□□□□ -2.03
SNX3O60493 EIF4EP4-201ENST00000424916 578 ntBASIC2.34□□□□□ -2.03
SNX3O60493 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX3O60493 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.34□□□□□ -2.03
SNX3O60493 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX3O60493 AC080013.2-201ENST00000460866 323 ntBASIC2.34□□□□□ -2.03
SNX3O60493 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.34□□□□□ -2.03
SNX3O60493 HMGN2P26-201ENST00000463169 339 ntBASIC2.34□□□□□ -2.03
SNX3O60493 AC079804.2-201ENST00000490376 200 ntBASIC2.34□□□□□ -2.03
SNX3O60493 RNU6-323P-201ENST00000521915 107 ntBASIC2.34□□□□□ -2.03
SNX3O60493 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX3O60493 AC103996.1-201ENST00000555468 102 ntBASIC2.34□□□□□ -2.03
SNX3O60493 MIR3944-201ENST00000581277 108 ntBASIC2.34□□□□□ -2.03
SNX3O60493 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
SNX3O60493 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
SNX3O60493 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.34□□□□□ -2.03
SNX3O60493 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SNX3O60493 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX3O60493 AC121333.1-201ENST00000567488 2709 ntBASIC2.33□□□□□ -2.04
SNX3O60493 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SNX3O60493 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX3O60493 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX3O60493 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX3O60493 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
SNX3O60493 RNU1-57P-201ENST00000384491 166 ntBASIC2.33□□□□□ -2.04
SNX3O60493 EIF4E2P1-201ENST00000393781 255 ntBASIC2.33□□□□□ -2.04
SNX3O60493 RNU4-26P-201ENST00000410270 107 ntBASIC2.33□□□□□ -2.04
SNX3O60493 RNU6-293P-201ENST00000411259 106 ntBASIC2.33□□□□□ -2.04
SNX3O60493 HMGB3P2-201ENST00000411913 584 ntBASIC2.33□□□□□ -2.04
SNX3O60493 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SNX3O60493 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX3O60493 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX3O60493 AC008267.5-201ENST00000424928 265 ntBASIC2.33□□□□□ -2.04
SNX3O60493 RPL35AP12-201ENST00000425362 338 ntBASIC2.33□□□□□ -2.04
SNX3O60493 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
SNX3O60493 AC243964.1-201ENST00000441814 261 ntBASIC2.33□□□□□ -2.04
SNX3O60493 EEF1B2P7-201ENST00000451177 676 ntBASIC2.33□□□□□ -2.04
SNX3O60493 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX3O60493 AC090515.1-201ENST00000465295 476 ntBASIC2.33□□□□□ -2.04
SNX3O60493 AC140059.1-201ENST00000489238 361 ntBASIC2.33□□□□□ -2.04
SNX3O60493 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX3O60493 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX3O60493 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX3O60493 AP005597.4-201ENST00000526762 229 ntBASIC2.33□□□□□ -2.04
SNX3O60493 AP003033.1-201ENST00000527244 415 ntBASIC2.33□□□□□ -2.04
SNX3O60493 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX3O60493 AC105137.2-201ENST00000569073 466 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms