Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC096745.1-201ENST00000509945 370 ntBASIC2.57□□□□□ -2
PRKNO60260 RNU6-559P-201ENST00000516151 98 ntBASIC2.57□□□□□ -2
PRKNO60260 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRKNO60260 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.57□□□□□ -2
PRKNO60260 AC007536.1-201ENST00000533382 349 ntBASIC2.57□□□□□ -2
PRKNO60260 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.57□□□□□ -2
PRKNO60260 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.57□□□□□ -2
PRKNO60260 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.57□□□□□ -2
PRKNO60260 AC100830.2-201ENST00000581636 240 ntBASIC2.57□□□□□ -2
PRKNO60260 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
PRKNO60260 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
PRKNO60260 AC020895.1-201ENST00000595362 272 ntBASIC2.57□□□□□ -2
PRKNO60260 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKNO60260 AC090115.4-201ENST00000609970 188 ntBASIC2.57□□□□□ -2
PRKNO60260 AL161629.2-201ENST00000615347 275 ntBASIC2.57□□□□□ -2
PRKNO60260 MIR6128-201ENST00000615528 109 ntBASIC2.57□□□□□ -2
PRKNO60260 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKNO60260 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKNO60260 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
PRKNO60260 ADAM3A-203ENST00000461344 2157 ntBASIC2.57□□□□□ -2
PRKNO60260 AC006026.1-201ENST00000444025 1803 ntBASIC2.56□□□□□ -2
PRKNO60260 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
PRKNO60260 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.56□□□□□ -2
PRKNO60260 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.56□□□□□ -2
PRKNO60260 RNU6-827P-201ENST00000365553 106 ntBASIC2.56□□□□□ -2
PRKNO60260 Y_RNA.387-201ENST00000383918 102 ntBASIC2.56□□□□□ -2
PRKNO60260 RNU6-1027P-201ENST00000383998 107 ntBASIC2.56□□□□□ -2
PRKNO60260 AL360182.1-201ENST00000397433 468 ntBASIC2.56□□□□□ -2
PRKNO60260 AL356057.3-201ENST00000402607 340 ntBASIC2.56□□□□□ -2
PRKNO60260 U3.37-201ENST00000408528 213 ntBASIC2.56□□□□□ -2
PRKNO60260 RN7SKP158-201ENST00000410453 326 ntBASIC2.56□□□□□ -2
PRKNO60260 RN7SKP123-201ENST00000410732 291 ntBASIC2.56□□□□□ -2
PRKNO60260 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.56□□□□□ -2
PRKNO60260 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.56□□□□□ -2
PRKNO60260 BPY2DP-201ENST00000422208 265 ntBASIC2.56□□□□□ -2
PRKNO60260 UBE2V1P4-201ENST00000425374 344 ntBASIC2.56□□□□□ -2
PRKNO60260 AL714022.1-201ENST00000439897 151 ntBASIC2.56□□□□□ -2
PRKNO60260 RNU7-187P-201ENST00000458985 68 ntBASIC2.56□□□□□ -2
PRKNO60260 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.56□□□□□ -2
PRKNO60260 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.56□□□□□ -2
PRKNO60260 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.56□□□□□ -2
PRKNO60260 GLYCAM1-201ENST00000546596 285 ntBASIC2.56□□□□□ -2
PRKNO60260 NACAP3-201ENST00000552100 481 ntBASIC2.56□□□□□ -2
PRKNO60260 FRG2DP-202ENST00000566967 323 ntBASIC2.56□□□□□ -2
PRKNO60260 AC010653.1-201ENST00000571108 881 ntBASIC2.56□□□□□ -2
PRKNO60260 MIR4319-201ENST00000577285 85 ntBASIC2.56□□□□□ -2
PRKNO60260 AL353621.2-201ENST00000605340 133 ntBASIC2.56□□□□□ -2
PRKNO60260 AC011890.2-201ENST00000613393 294 ntBASIC2.56□□□□□ -2
PRKNO60260 MIR6852-201ENST00000621699 66 ntBASIC2.56□□□□□ -2
PRKNO60260 AC138627.2-201ENST00000624202 601 ntBASIC2.56□□□□□ -2
PRKNO60260 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.56□□□□□ -2
PRKNO60260 MTND5P19-201ENST00000424872 1794 ntBASIC2.56□□□□□ -2
PRKNO60260 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRKNO60260 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRKNO60260 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.55□□□□□ -2
PRKNO60260 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRKNO60260 AC108206.1-201ENST00000570186 4159 ntBASIC2.55□□□□□ -2
PRKNO60260 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PRKNO60260 RNU5E-7P-201ENST00000365290 117 ntBASIC2.55□□□□□ -2
PRKNO60260 RNU6-601P-201ENST00000384540 107 ntBASIC2.55□□□□□ -2
PRKNO60260 RNU6-306P-201ENST00000384617 107 ntBASIC2.55□□□□□ -2
PRKNO60260 MIR1289-1-201ENST00000408836 144 ntBASIC2.55□□□□□ -2
PRKNO60260 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.55□□□□□ -2
PRKNO60260 FABP5P14-201ENST00000437273 393 ntBASIC2.55□□□□□ -2
PRKNO60260 AL513043.1-201ENST00000439124 535 ntBASIC2.55□□□□□ -2
PRKNO60260 RPL21P2-201ENST00000440049 481 ntBASIC2.55□□□□□ -2
PRKNO60260 HIGD1AP2-201ENST00000446367 280 ntBASIC2.55□□□□□ -2
PRKNO60260 AC018437.1-201ENST00000492214 406 ntBASIC2.55□□□□□ -2
PRKNO60260 RNU6-581P-201ENST00000516214 105 ntBASIC2.55□□□□□ -2
PRKNO60260 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.55□□□□□ -2
PRKNO60260 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
PRKNO60260 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.55□□□□□ -2
PRKNO60260 AC103996.1-201ENST00000555468 102 ntBASIC2.55□□□□□ -2
PRKNO60260 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRKNO60260 AC078899.3-201ENST00000599065 212 ntBASIC2.55□□□□□ -2
PRKNO60260 MIR6134-201ENST00000617606 109 ntBASIC2.55□□□□□ -2
PRKNO60260 AC010378.1-201ENST00000619270 362 ntBASIC2.55□□□□□ -2
PRKNO60260 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.55□□□□□ -2
PRKNO60260 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.55□□□□□ -2
PRKNO60260 SCARNA4-202ENST00000625402 129 ntBASIC2.55□□□□□ -2
PRKNO60260 MTND4LP32-201ENST00000636111 270 ntBASIC2.55□□□□□ -2
PRKNO60260 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKNO60260 AC110491.1-201ENST00000562191 2010 ntBASIC2.54□□□□□ -2
PRKNO60260 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
PRKNO60260 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
PRKNO60260 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKNO60260 SNORD62.1-201ENST00000362541 86 ntBASIC2.54□□□□□ -2
PRKNO60260 RNU6-78P-201ENST00000362897 107 ntBASIC2.54□□□□□ -2
PRKNO60260 RNU6-428P-201ENST00000362942 107 ntBASIC2.54□□□□□ -2
PRKNO60260 Y_RNA.151-201ENST00000363566 112 ntBASIC2.54□□□□□ -2
PRKNO60260 RNU4-76P-201ENST00000364509 141 ntBASIC2.54□□□□□ -2
PRKNO60260 Y_RNA.500-201ENST00000384466 111 ntBASIC2.54□□□□□ -2
PRKNO60260 RNU6-370P-201ENST00000411008 104 ntBASIC2.54□□□□□ -2
PRKNO60260 ATG3P1-201ENST00000419507 911 ntBASIC2.54□□□□□ -2
PRKNO60260 AL139281.1-201ENST00000422120 335 ntBASIC2.54□□□□□ -2
PRKNO60260 MTND1P14-201ENST00000427400 950 ntBASIC2.54□□□□□ -2
PRKNO60260 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.54□□□□□ -2
PRKNO60260 AC236972.1-201ENST00000433225 199 ntBASIC2.54□□□□□ -2
PRKNO60260 AC112220.1-201ENST00000434628 355 ntBASIC2.54□□□□□ -2
PRKNO60260 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms