Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 IGKV3-31-201ENST00000523109 329 ntBASIC2.14□□□□□ -2.07
VEGFDO43915 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.14□□□□□ -2.07
VEGFDO43915 MIR4703-201ENST00000577728 79 ntBASIC2.14□□□□□ -2.07
VEGFDO43915 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.14□□□□□ -2.07
VEGFDO43915 AC008147.4-201ENST00000617570 1204 ntBASIC2.14□□□□□ -2.07
VEGFDO43915 AC078883.4-201ENST00000623218 367 ntBASIC2.14□□□□□ -2.07
VEGFDO43915 ZNF355P-201ENST00000427301 3216 ntBASIC2.14□□□□□ -2.07
VEGFDO43915 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VEGFDO43915 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VEGFDO43915 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
VEGFDO43915 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VEGFDO43915 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
VEGFDO43915 RNU2-29P-201ENST00000410423 189 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 RNU2-32P-201ENST00000411193 191 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 DNAJC19P4-201ENST00000440115 345 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 AL162395.1-201ENST00000457882 422 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 BET1P1-201ENST00000482276 359 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.13□□□□□ -2.07
VEGFDO43915 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.13□□□□□ -2.07
VEGFDO43915 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.13□□□□□ -2.07
VEGFDO43915 RNU6-667P-201ENST00000517186 102 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.13□□□□□ -2.07
VEGFDO43915 AP001893.2-201ENST00000526949 202 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 AC022616.8-201ENST00000533569 253 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 AP000873.5-201ENST00000533906 236 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 AC233702.2-202ENST00000562547 291 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 SDR42E1P4-201ENST00000620894 481 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 MIR219B-201ENST00000637023 88 ntBASIC2.13□□□□□ -2.07
VEGFDO43915 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VEGFDO43915 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VEGFDO43915 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RNU6-1120P-201ENST00000362988 108 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RNU6-393P-201ENST00000384475 107 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RNU6-1274P-201ENST00000384557 107 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RN7SKP142-201ENST00000411236 328 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.12□□□□□ -2.07
VEGFDO43915 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.12□□□□□ -2.07
VEGFDO43915 AL669831.1-202ENST00000428504 417 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 CBX3P6-201ENST00000430257 527 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 GTF2IP13-201ENST00000438487 386 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.12□□□□□ -2.07
VEGFDO43915 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.12□□□□□ -2.07
VEGFDO43915 C1DP4-201ENST00000455429 424 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.12□□□□□ -2.07
VEGFDO43915 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.12□□□□□ -2.07
VEGFDO43915 RPS29P15-201ENST00000458329 171 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RPL30P12-201ENST00000474666 353 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RPL9P6-201ENST00000492764 598 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 HMGB1P35-201ENST00000503360 598 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 RNU6-377P-201ENST00000515965 102 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 MTCO2P4-201ENST00000517968 247 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.12□□□□□ -2.07
VEGFDO43915 AL391840.1-201ENST00000571144 367 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 AC040904.1-201ENST00000590850 223 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 AC087752.4-201ENST00000605911 462 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 AC073114.1-201ENST00000612027 490 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 AC099842.1-201ENST00000619919 596 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 AC022418.1-201ENST00000624118 445 ntBASIC2.12□□□□□ -2.07
VEGFDO43915 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VEGFDO43915 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
VEGFDO43915 Y_RNA.40-201ENST00000362645 93 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 RNU6-282P-201ENST00000365357 103 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 MIR504-201ENST00000385065 83 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 AC132479.1-201ENST00000449160 144 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.11□□□□□ -2.07
VEGFDO43915 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.11□□□□□ -2.07
VEGFDO43915 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.11□□□□□ -2.07
VEGFDO43915 MTCO3P7-201ENST00000510008 774 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 AC010493.1-201ENST00000513479 292 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 AC007834.2-201ENST00000536310 343 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 AC023050.3-201ENST00000541142 333 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.11□□□□□ -2.07
VEGFDO43915 AC078795.2-201ENST00000602835 1252 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.11□□□□□ -2.07
VEGFDO43915 AC005609.4-201ENST00000625071 447 ntBASIC2.11□□□□□ -2.07
VEGFDO43915 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
VEGFDO43915 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
VEGFDO43915 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VEGFDO43915 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.1□□□□□ -2.07
VEGFDO43915 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
VEGFDO43915 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
VEGFDO43915 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.1□□□□□ -2.07
VEGFDO43915 RNU6-105P-201ENST00000363909 104 ntBASIC2.1□□□□□ -2.07
VEGFDO43915 SNORD116-8-201ENST00000384365 95 ntBASIC2.1□□□□□ -2.07
VEGFDO43915 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
VEGFDO43915 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.1□□□□□ -2.07
VEGFDO43915 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.1□□□□□ -2.07
VEGFDO43915 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.1□□□□□ -2.07
VEGFDO43915 MTND4P32-201ENST00000437189 1237 ntBASIC2.1□□□□□ -2.07
VEGFDO43915 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.1□□□□□ -2.07
VEGFDO43915 FDX1P2-201ENST00000450769 375 ntBASIC2.1□□□□□ -2.07
VEGFDO43915 AL118520.1-201ENST00000450770 291 ntBASIC2.1□□□□□ -2.07
VEGFDO43915 AC098826.2-201ENST00000452011 651 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms