Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC007619.2-201ENST00000605743 379 ntBASIC3.66□□□□□ -1.82
FOXN1O15353 MIR4272-201ENST00000635924 64 ntBASIC3.66□□□□□ -1.82
FOXN1O15353 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.66□□□□□ -1.82
FOXN1O15353 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXN1O15353 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
FOXN1O15353 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.65□□□□□ -1.82
FOXN1O15353 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
FOXN1O15353 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
FOXN1O15353 Y_RNA.40-201ENST00000362645 93 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 Y_RNA.64-201ENST00000362845 102 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 Y_RNA.151-201ENST00000363566 112 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 Y_RNA.515-201ENST00000384535 112 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 MT-TC-201ENST00000387405 66 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 RNU6-293P-201ENST00000411259 106 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 AC092809.3-201ENST00000415453 231 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 MTND5P15-201ENST00000434246 349 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 AC025465.3-201ENST00000510570 311 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 AC040926.1-201ENST00000530195 238 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 OR5D17P-201ENST00000531492 978 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.65□□□□□ -1.83
FOXN1O15353 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.65□□□□□ -1.83
FOXN1O15353 AC096772.1-201ENST00000609146 564 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 TUG1_2.1-201ENST00000614234 87 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 AC099506.2-201ENST00000623074 221 ntBASIC3.65□□□□□ -1.83
FOXN1O15353 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
FOXN1O15353 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
FOXN1O15353 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.64□□□□□ -1.83
FOXN1O15353 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
FOXN1O15353 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXN1O15353 RNY3P11-201ENST00000364153 102 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.64□□□□□ -1.83
FOXN1O15353 MIR517A-201ENST00000385001 87 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 RNU4-65P-201ENST00000410473 140 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 RNU2-52P-201ENST00000410680 190 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AL645568.3-201ENST00000433683 316 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.64□□□□□ -1.83
FOXN1O15353 AL590664.1-201ENST00000448065 339 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 MTND4LP30-201ENST00000454092 297 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 HSPE1P6-201ENST00000479457 291 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.64□□□□□ -1.83
FOXN1O15353 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXN1O15353 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXN1O15353 AP003385.6-201ENST00000531603 374 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 HSPE1P20-201ENST00000538133 289 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AP002770.2-201ENST00000543613 532 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXN1O15353 TRAV37-201ENST00000553906 342 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AL137100.2-201ENST00000555786 315 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.64□□□□□ -1.83
FOXN1O15353 AC109446.1-201ENST00000566172 220 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 MIR4644-201ENST00000579929 84 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AC012119.1-201ENST00000603184 222 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AC002044.1-201ENST00000606707 158 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AC098479.1-201ENST00000609225 154 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 AC091903.1-201ENST00000624322 454 ntBASIC3.64□□□□□ -1.83
FOXN1O15353 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.64□□□□□ -1.83
FOXN1O15353 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
FOXN1O15353 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXN1O15353 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN1O15353 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
FOXN1O15353 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN1O15353 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN1O15353 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN1O15353 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN1O15353 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
FOXN1O15353 SNORA18.3-201ENST00000384122 132 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 Y_RNA.562-201ENST00000384695 113 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 RNU6-33P-201ENST00000384793 107 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
FOXN1O15353 AC245291.1-201ENST00000419501 328 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 RPS15AP6-201ENST00000420703 385 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.63□□□□□ -1.83
FOXN1O15353 RPL23AP22-201ENST00000437556 453 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.63□□□□□ -1.83
FOXN1O15353 AL031274.1-201ENST00000450334 232 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.63□□□□□ -1.83
FOXN1O15353 FO393415.2-201ENST00000480085 343 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 SNORA40.14-201ENST00000516543 86 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.63□□□□□ -1.83
FOXN1O15353 AP006587.4-201ENST00000526053 529 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 RRN3P3-201ENST00000549207 578 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 CYCSP39-201ENST00000565821 309 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.63□□□□□ -1.83
FOXN1O15353 ELOCP5-201ENST00000604924 333 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 RAC1P9-201ENST00000604990 392 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 AC006329.2-201ENST00000611491 394 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 AC073476.4-201ENST00000628409 72 ntBASIC3.63□□□□□ -1.83
FOXN1O15353 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXN1O15353 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
FOXN1O15353 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN1O15353 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXN1O15353 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
FOXN1O15353 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
FOXN1O15353 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXN1O15353 AL137003.2-201ENST00000606924 2538 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 MTND5P6-201ENST00000422338 1798 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 MIR148B-201ENST00000362252 99 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 Y_RNA.48-201ENST00000362710 103 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms