Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 AC018448.1-201ENST00000552843 316 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 CYP4A27P-201ENST00000567218 190 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 MIR3609-201ENST00000582661 80 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 AL078605.1-201ENST00000603529 500 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 MIR486-1-201ENST00000612171 68 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 AC068831.7-201ENST00000616954 363 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 ZNF204P-201ENST00000416749 2397 ntBASIC3.67□□□□□ -1.82
SHISA3A0PJX4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHISA3A0PJX4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 AC106871.1-201ENST00000568324 3102 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RNA5SP175-201ENST00000364275 119 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 Y_RNA.262-201ENST00000364641 102 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RNU4-56P-201ENST00000364700 142 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RN7SKP53-201ENST00000411337 315 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 MTATP6P29-201ENST00000415057 132 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 AC245028.1-201ENST00000423259 256 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RNU7-200P-201ENST00000516105 62 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RNU1-61P-201ENST00000516107 151 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 MIR2114-201ENST00000516645 80 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 RNA5SP143-201ENST00000516936 115 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 MRPS18CP4-201ENST00000535821 231 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 MIR6748-201ENST00000610433 71 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 AC005520.5-201ENST00000613926 164 ntBASIC3.66□□□□□ -1.82
SHISA3A0PJX4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHISA3A0PJX4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHISA3A0PJX4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.65□□□□□ -1.82
SHISA3A0PJX4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SHISA3A0PJX4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SHISA3A0PJX4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 RNA5SP502-201ENST00000362694 119 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 Y_RNA.291-201ENST00000364886 113 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 RNU1-64P-201ENST00000365443 163 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 MIR192-201ENST00000384915 110 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 MIR298-201ENST00000401212 88 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AL590139.1-201ENST00000416267 400 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AL591419.1-201ENST00000427423 339 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AL606753.1-201ENST00000427435 87 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 RNA5SP310-201ENST00000459084 116 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AC090525.1-201ENST00000479116 478 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 RNU2-58P-201ENST00000516403 183 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 SNORA31.16-201ENST00000516773 139 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 SNORD19.2-201ENST00000516978 73 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 MIR5692C2-201ENST00000577959 77 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 MIR4330-201ENST00000579077 105 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AC004944.1-201ENST00000517807 3059 ntBASIC3.65□□□□□ -1.83
SHISA3A0PJX4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHISA3A0PJX4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 MIR331-201ENST00000362302 94 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RNU1-62P-201ENST00000362599 164 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RNU6-923P-201ENST00000364753 107 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 SNORA40.19-201ENST00000390846 128 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 EI24P2-201ENST00000397776 1076 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AL512633.1-201ENST00000399931 655 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms