Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 CBX3P8-201ENST00000532412 525 ntBASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 HSPE1P4-201ENST00000550617 308 ntBASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL354696.1-201ENST00000614652 497 ntBASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RMST_2.1-201ENST00000617263 136 ntBASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR6788-201ENST00000618842 66 ntBASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR8063-201ENST00000621930 81 ntBASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR6767-201ENST00000637302 66 ntBASIC0.74□□□□□ -2.29
TCRBV4S1A1TA0A5B7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MTND5P9-201ENST00000503854 1755 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 snoU2_19.1-201ENST00000362361 80 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNA5SP327-201ENST00000362494 101 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-414P-201ENST00000363705 104 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-296P-201ENST00000384608 107 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR29B2-201ENST00000385055 81 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR1284-201ENST00000408337 120 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR548J-201ENST00000408833 112 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU2-23P-201ENST00000410545 195 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 PIGPP2-201ENST00000411569 458 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 SNRPFP3-201ENST00000457792 225 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC130509.1-201ENST00000464158 433 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MTND1P3-201ENST00000484956 952 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 HMGB1P30-201ENST00000492455 606 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-1028P-201ENST00000517164 93 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AP003355.1-201ENST00000518956 587 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 DEFB108A-201ENST00000530110 222 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC090115.3-201ENST00000553218 849 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL157871.3-201ENST00000557231 293 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC092325.1-201ENST00000566449 554 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC123912.5-201ENST00000605470 343 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC018926.1-201ENST00000616335 435 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC123767.1-202ENST00000620407 817 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC008993.2-201ENST00000631744 806 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MTND5P42-201ENST00000637720 498 ntBASIC0.73□□□□□ -2.29
TCRBV4S1A1TA0A5B7 ICE2P2-201ENST00000483823 2787 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 Y_RNA.578-201ENST00000390903 88 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC139712.2-201ENST00000424302 339 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC003071.1-201ENST00000451219 789 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL583843.1-201ENST00000456070 346 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RPL26P26-201ENST00000480251 434 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MTCO3P27-201ENST00000514397 196 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-914P-201ENST00000516749 109 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC019176.1-201ENST00000518519 225 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 HSPE1P19-201ENST00000603327 295 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL355802.3-201ENST00000607571 545 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC130454.1-201ENST00000622948 401 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AP003485.1-201ENST00000625093 753 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC099654.8-201ENST00000637757 681 ntBASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV4S1A1TA0A5B7 Y_RNA.33-201ENST00000362591 102 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-212P-201ENST00000362642 104 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU5A-8P-201ENST00000364102 114 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR489-201ENST00000384923 84 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 Y_RNA.597-201ENST00000410463 100 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RPS15AP10-201ENST00000432472 382 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL591212.2-201ENST00000433923 257 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 UBE2V1P8-201ENST00000437166 265 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 JTBP1-201ENST00000441314 247 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RPS4XP11-201ENST00000446897 772 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-953P-201ENST00000459154 107 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC016957.1-201ENST00000534895 309 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CR383656.8-201ENST00000549046 145 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 TRAV32-201ENST00000553993 340 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC005786.1-201ENST00000588553 154 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MTATP6P2-201ENST00000603319 678 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC095038.3-201ENST00000634439 195 ntBASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-621P-201ENST00000364752 109 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms