Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AC010975.3-201ENST00000618727 978 ntBASIC0.44□□□□□ -2.34
TRAV2A0A0B4J234 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV2A0A0B4J234 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 MIR520A-201ENST00000384862 85 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 RNU2-42P-201ENST00000410697 113 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 AC016831.2-201ENST00000417179 352 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 AC114482.1-201ENST00000418010 247 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 TIMM9P1-201ENST00000436122 256 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 snoU13.30-201ENST00000458951 104 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 HMGN2P9-201ENST00000476875 229 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 RNU6-551P-201ENST00000516661 103 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 AL365204.3-201ENST00000612448 685 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 MTND4P16-201ENST00000466108 1367 ntBASIC0.43□□□□□ -2.34
TRAV2A0A0B4J234 MIR16-2-201ENST00000362117 81 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 MIR29B2-201ENST00000385055 81 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 CBX3P9-201ENST00000402326 552 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 MIR548J-201ENST00000408833 112 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 DPRXP1-201ENST00000426312 460 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 TXNL1P1-201ENST00000429528 554 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AL591043.1-201ENST00000432461 424 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 MTCYBP15-201ENST00000433123 1127 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC026414.1-201ENST00000504046 698 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC009646.1-201ENST00000510455 318 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 SNORA3.4-201ENST00000515969 96 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 RNU6-143P-201ENST00000516942 93 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 SNORA70.22-201ENST00000517160 124 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC090142.3-201ENST00000519012 385 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC011604.1-201ENST00000545978 196 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 MIR5000-201ENST00000577717 103 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 MIR3664-201ENST00000579074 99 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 MTCO2P2-201ENST00000591258 225 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC100814.1-201ENST00000606963 623 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 LINC02555-201ENST00000563933 1951 ntBASIC0.42□□□□□ -2.34
TRAV2A0A0B4J234 AC009541.1-201ENST00000438279 2662 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 RNU6-942P-201ENST00000363002 107 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 Y_RNA.255-201ENST00000364581 97 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 RNU6-843P-201ENST00000384454 104 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 RPL21P1-201ENST00000399532 476 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MTCO1P56-201ENST00000401674 224 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 AL117342.1-201ENST00000404861 406 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 AC083875.1-201ENST00000419509 405 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 CETN4P-201ENST00000432407 469 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MTND4P25-201ENST00000441039 533 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 ELOCP30-201ENST00000447108 299 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MTND1P31-201ENST00000449206 961 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MTND1P16-201ENST00000465177 898 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 BET1P1-201ENST00000482276 359 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MIR449C-201ENST00000516047 92 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 RNU6-1223P-201ENST00000517124 104 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 RNA5SP490-201ENST00000517141 136 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 DEFB108E-201ENST00000524692 240 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 AP003484.1-201ENST00000530974 250 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MIR4714-201ENST00000580728 77 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 AC092656.1-203ENST00000624134 423 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MIR3529-201ENST00000637713 78 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 MTND4P21-201ENST00000453886 1357 ntBASIC0.41□□□□□ -2.34
TRAV2A0A0B4J234 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AL359634.1-202ENST00000404721 284 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AC027644.1-201ENST00000419595 298 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AL606517.1-201ENST00000446914 387 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 SNRPGP9-201ENST00000456025 225 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AC134050.1-201ENST00000495088 933 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 RPF2P2-201ENST00000504693 896 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 HMGB1P28-201ENST00000507778 552 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AC136618.2-201ENST00000575091 400 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AC008751.2-201ENST00000597885 980 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 BNIP3P9-201ENST00000603714 553 ntBASIC0.4□□□□□ -2.35
TRAV2A0A0B4J234 AL451064.1-201ENST00000607718 471 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms