Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL590632.1-201ENST00000424289 371 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 HMGB1P18-201ENST00000438801 619 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 DAP3P1-201ENST00000441522 278 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 PCMTD1P1-201ENST00000455560 355 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RPL30P12-201ENST00000474666 353 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AC096576.1-201ENST00000489014 359 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AC103851.1-201ENST00000506833 274 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU1-143P-201ENST00000516296 146 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU1-54P-201ENST00000517181 120 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AC134698.4-201ENST00000523451 826 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AC027176.1-201ENST00000560204 514 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR3199-1-201ENST00000582434 88 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AC091135.1-201ENST00000585943 307 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 U1.23-201ENST00000610293 146 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 AC025253.1-201ENST00000613623 543 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU1-68P-201ENST00000615382 146 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 U1.39-201ENST00000621562 146 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 TPTEP1-208ENST00000636884 213 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-212P-201ENST00000362642 104 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RNA5SP374-201ENST00000362939 125 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-461P-201ENST00000364195 107 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-805P-201ENST00000365643 106 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-1009P-201ENST00000390996 107 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 U6atac.2-201ENST00000408644 118 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 CYCSP48-201ENST00000417124 323 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AL353705.1-201ENST00000433468 480 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 USP9YP8-201ENST00000441913 500 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 MTND1P11-201ENST00000456661 876 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU7-187P-201ENST00000458985 68 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AC080128.1-201ENST00000474389 1917 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AP005902.1-201ENST00000521358 186 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR2682-201ENST00000580305 110 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AC243960.4-201ENST00000600532 288 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AC069294.1-201ENST00000608397 350 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AL133215.3-201ENST00000609801 448 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AC104237.2-201ENST00000612456 443 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 AC091903.1-201ENST00000624322 454 ntBASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A3BPQ9Y5P4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 Y_RNA.142-201ENST00000363491 102 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR186-201ENST00000384988 86 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR23A-201ENST00000385245 73 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR548K-201ENST00000408406 116 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 RPL23AP22-201ENST00000437556 453 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 RPS12P18-201ENST00000442381 270 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 snoU13.14-201ENST00000459372 104 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 RN7SL863P-201ENST00000462370 296 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 RPL23AP70-201ENST00000483361 460 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 RPS27P27-201ENST00000498779 255 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC023141.11-201ENST00000508864 202 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 HPRT1P3-201ENST00000539521 576 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC124303.1-201ENST00000605703 360 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC019193.3-201ENST00000609144 554 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AC063943.3-201ENST00000615562 356 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 AL133216.2-202ENST00000634512 349 ntBASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A3BPQ9Y5P4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 MTND4P27-201ENST00000450813 1354 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-593P-201ENST00000364716 112 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 RNA5SP293-201ENST00000410527 113 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms