Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC107401.1-201ENST00000503426 685 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC074344.1-201ENST00000512823 224 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC135279.1-201ENST00000543493 504 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC078795.2-201ENST00000602835 1252 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC012507.3-201ENST00000603556 477 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC005046.1-201ENST00000608515 625 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC124864.2-201ENST00000624736 186 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 OR5AK4P-201ENST00000635912 903 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-623P-201ENST00000363143 105 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNA5SP125-201ENST00000364843 120 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-996P-201ENST00000365438 107 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-517P-201ENST00000384362 110 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-843P-201ENST00000384454 104 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-1127P-201ENST00000384580 107 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-482P-201ENST00000391068 107 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 CYCSP33-201ENST00000414485 327 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 MTCO3P41-201ENST00000414801 328 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AC138623.1-201ENST00000418060 216 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 USP9YP20-201ENST00000419224 558 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 PGBD4P6-201ENST00000421501 610 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RPS12P2-201ENST00000439728 269 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 MTCO2P7-201ENST00000446518 666 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AC073901.1-201ENST00000462471 408 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AC112771.1-201ENST00000463581 102 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 MED28P2-201ENST00000475771 317 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AC105137.2-201ENST00000569073 466 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AC025165.5-201ENST00000602802 578 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AL138963.2-201ENST00000605137 226 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AP001330.5-201ENST00000607176 411 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 AL158209.2-201ENST00000619266 216 ntBASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-552P-201ENST00000362869 119 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-393P-201ENST00000384475 107 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 MTCYBP8-201ENST00000422855 651 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL606489.2-201ENST00000433886 234 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 CALM1P1-201ENST00000442082 433 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 SCARNA18-201ENST00000459004 134 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 RPL23AP45-201ENST00000476406 468 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 RPL7P43-201ENST00000478876 753 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL163973.1-201ENST00000484753 577 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 RPL9P6-201ENST00000492764 598 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.687-201ENST00000516558 91 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AC015712.3-201ENST00000559380 164 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL138976.2-201ENST00000563989 694 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AC004223.2-201ENST00000590309 544 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL136363.2-201ENST00000604173 851 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL355297.2-201ENST00000604792 129 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AL354950.2-201ENST00000617939 290 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 AC139792.3-201ENST00000623525 224 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 CR381653.2-201ENST00000624041 768 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR6863-201ENST00000636112 90 ntBASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.4□□□□□ -2.03
PCDHGA1Q9Y5H4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-434P-201ENST00000384376 107 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.517-201ENST00000384551 106 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR561-201ENST00000385216 97 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORD70.1-201ENST00000391007 85 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU4-26P-201ENST00000410270 107 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AC073415.1-201ENST00000449240 153 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 SNRPFP3-201ENST00000457792 225 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 TBCAP3-201ENST00000512475 312 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 SMURF2P1-201ENST00000514992 481 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AC118273.2-201ENST00000532092 465 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms