Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.84□□□□□ -2.28
SCN8AQ9UQD0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.84□□□□□ -2.28
SCN8AQ9UQD0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.84□□□□□ -2.28
SCN8AQ9UQD0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.84□□□□□ -2.28
SCN8AQ9UQD0 AL512605.2-201ENST00000592972 256 ntBASIC0.84□□□□□ -2.28
SCN8AQ9UQD0 BNIP3P30-201ENST00000601184 574 ntBASIC0.84□□□□□ -2.28
SCN8AQ9UQD0 AC010487.4-201ENST00000637027 61 ntBASIC0.84□□□□□ -2.28
SCN8AQ9UQD0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 LINC02555-201ENST00000563933 1951 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 SNORD114-23-201ENST00000363536 72 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 snoU13.14-201ENST00000459372 104 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC005908.1-201ENST00000468701 347 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RNA5SP436-201ENST00000516020 115 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AP003392.2-201ENST00000527269 208 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AP000763.2-201ENST00000540641 163 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RRN3P3-201ENST00000549207 578 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC098483.2-201ENST00000603158 454 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 Z82243.1-201ENST00000609432 473 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC009269.6-201ENST00000621778 588 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RNU6-289P-201ENST00000364093 107 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 Y_RNA.408-201ENST00000383987 102 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AL357139.1-201ENST00000407792 426 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RNU2-36P-201ENST00000410361 191 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AL445305.1-201ENST00000432577 575 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RPL30P6-201ENST00000475925 342 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 MTCYBP40-201ENST00000509390 1135 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RNY4P37-201ENST00000516225 96 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RNU2-53P-201ENST00000516257 147 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RNU6-1225P-201ENST00000516336 65 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 HSPE1P4-201ENST00000550617 308 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 RN7SL793P-201ENST00000583259 296 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 VN1R87P-201ENST00000596706 487 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC021171.1-201ENST00000603137 706 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC078880.5-201ENST00000617845 421 ntBASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN8AQ9UQD0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 Y_RNA.67-201ENST00000362870 100 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 snoZ40.1-201ENST00000364540 72 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 RNU6-609P-201ENST00000365459 107 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 SNORD116-20-201ENST00000384529 92 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 MRPL35P3-201ENST00000421557 364 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AC104651.1-201ENST00000427559 735 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AC108729.1-201ENST00000487812 947 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 RNU6-902P-201ENST00000517212 91 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AP003034.1-201ENST00000534621 422 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 RAB11AP2-201ENST00000545905 639 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 AC093012.1-202ENST00000549403 582 ntBASIC0.82□□□□□ -2.28
SCN8AQ9UQD0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 RNA5SP493-201ENST00000364115 91 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AL359704.1-201ENST00000411586 781 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AL953862.1-201ENST00000423016 168 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AL627311.1-201ENST00000431514 115 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 MTCO1P44-201ENST00000441935 243 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 MTND2P33-201ENST00000506452 1031 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC104072.1-201ENST00000568817 668 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 RPL21P136-201ENST00000605378 396 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 ZNF29P-201ENST00000225587 168 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 RNU6-17P-201ENST00000384245 107 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 RNU6-18P-201ENST00000384527 107 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AL079342.2-201ENST00000403367 482 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC009518.2-201ENST00000418056 731 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC025465.3-201ENST00000510570 311 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 DEFB130C-202ENST00000530001 230 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 AC004908.3-201ENST00000610248 625 ntBASIC0.81□□□□□ -2.28
SCN8AQ9UQD0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.8□□□□□ -2.28
SCN8AQ9UQD0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms