Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 NEAT1-202ENST00000501122 22743 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 ZNF702P-202ENST00000434269 1966 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 MIR513A2-201ENST00000385249 127 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AL157831.1-201ENST00000426134 473 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC009296.1-201ENST00000443146 155 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC022493.1-201ENST00000492984 337 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-1114P-201ENST00000516022 107 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-27P-201ENST00000516146 107 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 RNA5SP360-201ENST00000516555 118 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-521P-201ENST00000516663 105 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC021269.2-201ENST00000532318 330 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 CYP4A43P-201ENST00000568156 121 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 NF1P5-201ENST00000588287 448 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC005176.2-201ENST00000596933 147 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 MIR6844-201ENST00000637122 62 ntBASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDZRN3Q9UPQ7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 Y_RNA.219-201ENST00000364232 113 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 MIR200C-201ENST00000384980 68 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-588P-201ENST00000410281 105 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 RPL23AP45-201ENST00000476406 468 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 AC108145.1-201ENST00000503770 153 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 RNU5F-2P-201ENST00000516066 82 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 AL391261.3-201ENST00000557194 520 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 AC024220.1-201ENST00000603675 484 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 AP001318.4-201ENST00000616637 121 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 SRP72P2-201ENST00000344851 1979 ntBASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDZRN3Q9UPQ7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 Y_RNA.280-201ENST00000364765 112 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 SNORD51-201ENST00000384320 80 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-880P-201ENST00000384526 107 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-768P-201ENST00000384683 107 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 MIR449B-201ENST00000384995 97 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 AC096638.1-201ENST00000444678 216 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 RNA5SP165-201ENST00000517142 115 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 RN7SKP258-201ENST00000517151 304 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 AC004832.5-201ENST00000608677 401 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 AL021997.2-201ENST00000615674 271 ntBASIC5.4□□□□□ -1.54
PDZRN3Q9UPQ7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.4□□□□□ -1.55
PDZRN3Q9UPQ7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDZRN3Q9UPQ7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDZRN3Q9UPQ7 AL139811.1-201ENST00000424779 2299 ntBASIC5.4□□□□□ -1.55
PDZRN3Q9UPQ7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.4□□□□□ -1.55
PDZRN3Q9UPQ7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDZRN3Q9UPQ7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 RNA5SP175-201ENST00000364275 119 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 RNA5SP130-201ENST00000364431 114 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-1152P-201ENST00000384576 107 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 Y_RNA.584-201ENST00000391090 114 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 MTHFD2P2-201ENST00000407725 247 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 SNORA11.1-201ENST00000408133 129 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-554P-201ENST00000410466 106 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AK3P2-201ENST00000507976 429 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AC092470.1-201ENST00000546187 132 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AC069240.1-201ENST00000548774 375 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 TRAV37-201ENST00000553906 342 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 SCARNA4-201ENST00000629045 128 ntBASIC5.39□□□□□ -1.55
PDZRN3Q9UPQ7 MIR6715B-201ENST00000637172 77 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms