Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC88CQ9P219 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 Y_RNA.122-201ENST00000363331 96 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 SNORD115.1-201ENST00000391109 76 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 ELOCP17-201ENST00000414751 326 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AL161651.1-201ENST00000440882 223 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC245517.4-201ENST00000448601 281 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AL009048.1-201ENST00000450437 298 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC004223.1-201ENST00000479840 271 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 BNIP3P30-201ENST00000601184 574 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC112187.2-201ENST00000604345 283 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC018638.7-201ENST00000605836 1114 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 MIR15A-201ENST00000607334 83 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC098614.4-201ENST00000607601 462 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 Y_RNA.224-201ENST00000364308 111 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 ERHP2-201ENST00000402323 299 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC010153.1-201ENST00000432862 727 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC139453.3-201ENST00000493276 369 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 UBE2V1P12-201ENST00000503954 474 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 MTND2P33-201ENST00000506452 1031 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 RNU6-64P-201ENST00000517119 105 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC121334.2-201ENST00000605387 271 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AC107952.2-201ENST00000606048 486 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 AL050343.2-201ENST00000607338 280 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 MIR6734-201ENST00000621166 68 ntBASIC1.01□□□□□ -2.25
CCDC88CQ9P219 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1□□□□□ -2.25
CCDC88CQ9P219 MIR412-201ENST00000362142 91 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 SNORA8-201ENST00000384574 139 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 MIR558-201ENST00000384920 94 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 MIR1283-2-201ENST00000408621 87 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1□□□□□ -2.25
CCDC88CQ9P219 AC092648.1-201ENST00000425870 423 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 AL354941.1-201ENST00000438600 464 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1□□□□□ -2.25
CCDC88CQ9P219 RPL23AP35-201ENST00000451906 501 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 AC092001.1-201ENST00000453012 261 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1□□□□□ -2.25
CCDC88CQ9P219 MIR1273C-201ENST00000578669 77 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 AC136443.5-201ENST00000603741 370 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 AC027807.2-201ENST00000616099 408 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 U1.36-201ENST00000620684 176 ntBASIC1□□□□□ -2.25
CCDC88CQ9P219 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1□□□□□ -2.25
CCDC88CQ9P219 RNU6-188P-201ENST00000364207 107 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU4-28P-201ENST00000364739 141 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU6-546P-201ENST00000383991 107 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU6-622P-201ENST00000384272 103 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU6-817P-201ENST00000391083 104 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU6-1245P-201ENST00000411130 106 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RPL30P13-201ENST00000418873 348 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RPL23AP30-201ENST00000432419 501 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL008629.1-201ENST00000438615 184 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 CR769776.1-201ENST00000441254 787 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RPS4XP11-201ENST00000446897 772 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL590365.1-201ENST00000450788 243 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU2-10P-201ENST00000516375 211 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU7-51P-201ENST00000516560 62 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL137100.2-201ENST00000555786 315 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MTND4P33-201ENST00000556706 766 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL138889.2-201ENST00000603883 242 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC013244.3-201ENST00000605614 388 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL391834.2-201ENST00000609982 546 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AL139418.1-201ENST00000613613 177 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC021755.4-201ENST00000616620 456 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 Y_RNA.18-201ENST00000362461 102 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 SNORA62.1-201ENST00000364287 154 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MIR499A-201ENST00000384903 122 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MIR122-201ENST00000385044 85 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 RNU6-1176P-201ENST00000390955 107 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MIR1284-201ENST00000408337 120 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 OR9R1P-201ENST00000412200 877 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 MTND3P1-201ENST00000441336 220 ntBASIC0.99□□□□□ -2.25
CCDC88CQ9P219 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.99□□□□□ -2.25
CCDC88CQ9P219 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms