Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PARPBPQ9NWS1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 LINC02555-201ENST00000563933 1951 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 RNU6-227P-201ENST00000362865 103 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 RNU1-18P-201ENST00000363062 164 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.270-201ENST00000364693 104 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 U3.13-201ENST00000364804 214 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AP000567.1-201ENST00000406413 156 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 RN7SKP156-201ENST00000410308 342 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AL591419.1-201ENST00000427423 339 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 RPS29P7-201ENST00000439662 171 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 RN7SKP210-201ENST00000459176 261 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 RPL31P13-201ENST00000484151 370 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 RNU6-377P-201ENST00000515965 102 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.700-201ENST00000516806 100 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC022695.1-201ENST00000522089 237 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC090877.1-201ENST00000561418 344 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC010928.2-201ENST00000588017 287 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AL137849.1-201ENST00000604767 169 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC073657.2-201ENST00000605661 303 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 AC240442.1-201ENST00000616055 283 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PARPBPQ9NWS1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC010733.2-201ENST00000589496 5702 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RNA5SP295-201ENST00000362655 121 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RNY3P4-201ENST00000384428 101 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 MIR607-201ENST00000385241 96 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 MIR591-201ENST00000385290 95 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RPS29P13-201ENST00000402041 169 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 MTCO2P33-201ENST00000402100 465 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RN7SKP202-201ENST00000410439 330 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 HMGB3P8-201ENST00000449709 577 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC108043.1-201ENST00000512696 574 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RNU4-71P-201ENST00000516258 113 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RNU6-255P-201ENST00000516957 105 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RN7SL703P-201ENST00000578485 302 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 MIR5187-201ENST00000583479 76 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RPL23AP78-201ENST00000599928 470 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 SNRPGP15-201ENST00000600149 222 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC097372.5-201ENST00000623665 376 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC243829.7-201ENST00000633081 225 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 U4.7-201ENST00000638126 106 ntBASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PARPBPQ9NWS1 AC004925.1-201ENST00000624256 2706 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RNU6-78P-201ENST00000362897 107 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.76-201ENST00000362931 109 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.200-201ENST00000364018 102 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RNU6-335P-201ENST00000364563 113 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RNA5SP424-201ENST00000390988 115 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.581-201ENST00000391017 97 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 HMGN2P8-201ENST00000391458 268 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 MIR1298-201ENST00000408783 112 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 TOMM20P4-201ENST00000427861 435 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RPL21P40-201ENST00000428586 483 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 ANXA2P1-201ENST00000505539 926 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 SNORA31.6-201ENST00000516241 130 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RNU6-1012P-201ENST00000516606 109 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 Y_RNA.706-201ENST00000516933 99 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RN7SKP272-201ENST00000516988 232 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 RNU6-789P-201ENST00000517105 102 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms