Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
RLIMQ9NVW2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.2□□□□□ -1.9
RLIMQ9NVW2 AC106785.1-201ENST00000565935 262 ntBASIC3.2□□□□□ -1.9
RLIMQ9NVW2 MIR5696-201ENST00000578474 85 ntBASIC3.2□□□□□ -1.9
RLIMQ9NVW2 7SK.7-201ENST00000603504 247 ntBASIC3.2□□□□□ -1.9
RLIMQ9NVW2 AL355877.2-201ENST00000603670 358 ntBASIC3.2□□□□□ -1.9
RLIMQ9NVW2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.2□□□□□ -1.9
RLIMQ9NVW2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RLIMQ9NVW2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
RLIMQ9NVW2 AC010889.1-201ENST00000566193 2666 ntBASIC3.2□□□□□ -1.9
RLIMQ9NVW2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RLIMQ9NVW2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RLIMQ9NVW2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC005592.1-201ENST00000566527 1640 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 RNU1-115P-201ENST00000365329 160 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AL138885.1-201ENST00000405921 675 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 RNU2-23P-201ENST00000410545 195 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC017083.1-201ENST00000428093 483 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC007969.2-201ENST00000441891 191 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AL353705.4-201ENST00000449661 238 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AL353752.1-201ENST00000454946 260 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC021146.2-201ENST00000504736 556 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC104619.4-201ENST00000510773 249 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 RN7SKP18-201ENST00000516005 275 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 RNU6-1046P-201ENST00000516538 107 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AL590705.4-201ENST00000532209 134 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC007375.1-201ENST00000554513 578 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC091152.3-201ENST00000604227 325 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AL162373.1-201ENST00000620433 407 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RLIMQ9NVW2 AC091812.1-201ENST00000432235 1948 ntBASIC3.19□□□□□ -1.9
RLIMQ9NVW2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AC010680.1-201ENST00000590024 3590 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU6-450P-201ENST00000364654 107 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 U3.13-201ENST00000364804 214 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU1-64P-201ENST00000365443 163 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AL359837.1-201ENST00000381357 287 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU6-843P-201ENST00000384454 104 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AC138623.1-201ENST00000418060 216 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 SNORD105B-201ENST00000458770 79 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU1-95P-201ENST00000516357 160 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU4-77P-201ENST00000516692 156 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU1-128P-201ENST00000516704 160 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RNU7-4P-201ENST00000516961 62 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.720-201ENST00000517166 92 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 IGKV2-23-201ENST00000518729 323 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 HSPE1P4-201ENST00000550617 308 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AC060766.3-201ENST00000591442 263 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AC136443.5-201ENST00000603741 370 ntBASIC3.18□□□□□ -1.9
RLIMQ9NVW2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RLIMQ9NVW2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 RNU4-42P-201ENST00000364738 142 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 SNORA5A-201ENST00000384111 134 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 PTMAP5-201ENST00000393073 333 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL356057.3-201ENST00000402607 340 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC093578.1-201ENST00000415219 368 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 RPL39P29-201ENST00000447779 157 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL513124.1-201ENST00000450410 614 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL441985.1-201ENST00000457727 251 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 RNU7-87P-201ENST00000459343 62 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 TOMM22P6-201ENST00000465035 409 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms