Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 RNU6-314P-201ENST00000516574 104 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 RNA5SP402-201ENST00000517148 110 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 AP001893.2-201ENST00000526949 202 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 MTCO3P23-201ENST00000561363 289 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 AC105137.2-201ENST00000569073 466 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 MIR5007-201ENST00000583098 95 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 RPS15AP11-201ENST00000594193 385 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 BNIP3P30-201ENST00000601184 574 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 AC004492.1-201ENST00000607036 742 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 AP001330.5-201ENST00000607176 411 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.96□□□□□ -1.94
SMC4Q9NTJ3 RNU6-434P-201ENST00000384376 107 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 RNU6-1127P-201ENST00000384580 107 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 RNA5SP508-201ENST00000411327 119 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 RPS3AP44-201ENST00000425466 790 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 AC073415.1-201ENST00000449240 153 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 PSPHP1-201ENST00000450062 261 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 RNU6-1178P-201ENST00000516674 107 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 AC136619.2-201ENST00000563361 631 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 MIR5571-201ENST00000577998 113 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 MIR3945-201ENST00000581853 98 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 MIR3941-201ENST00000582572 103 ntBASIC2.95□□□□□ -1.94
SMC4Q9NTJ3 AL354685.2-201ENST00000448218 1447 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RNU6-858P-201ENST00000362436 107 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RNU6-552P-201ENST00000362869 119 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RNU6-996P-201ENST00000365438 107 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 Y_RNA.480-201ENST00000384364 102 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RNU6-393P-201ENST00000384475 107 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 MIR218-1-201ENST00000384999 110 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RPS4XP7-201ENST00000406274 780 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AF274854.1-201ENST00000413236 615 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AL365400.1-201ENST00000431854 640 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AC016691.1-201ENST00000441321 413 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 SNORA40.12-201ENST00000516329 111 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RNA5SP281-201ENST00000516504 135 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 SNORA43.2-201ENST00000516652 128 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RNU1-104P-201ENST00000517280 175 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AC109329.1-201ENST00000518744 317 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AC078814.3-201ENST00000553036 491 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 TPRKBP2-201ENST00000565969 475 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 MYL12BP1-201ENST00000569826 507 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AC025165.5-201ENST00000602802 578 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AC026585.1-201ENST00000619582 524 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 RMST_7.1-201ENST00000621935 268 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 MIR6766-201ENST00000622641 72 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AL031601.2-202ENST00000622650 282 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 AC022418.1-201ENST00000624118 445 ntBASIC2.94□□□□□ -1.94
SMC4Q9NTJ3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 RNU6-1090P-201ENST00000364065 94 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 RNU6-1303P-201ENST00000364841 107 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 RNU6-483P-201ENST00000384088 108 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 RNU6-443P-201ENST00000384780 107 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 MIR548F1-201ENST00000408667 84 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 PGBD4P6-201ENST00000421501 610 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC003685.2-201ENST00000422795 395 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 SNRPFP3-201ENST00000457792 225 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC008526.1-201ENST00000509149 338 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 Y_RNA.693-201ENST00000516641 110 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AL137161.1-201ENST00000532231 390 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC021646.1-201ENST00000605469 484 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AL121917.1-203ENST00000605534 577 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 Z69720.2-201ENST00000624755 279 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 AC080100.1-201ENST00000624239 5356 ntBASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SMC4Q9NTJ3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms