Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 SNORD14B-201ENST00000364533 90 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 RNU6-641P-201ENST00000384006 107 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 RPL22P18-201ENST00000417197 377 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 ELOCP4-201ENST00000420090 333 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 NDUFB1P2-201ENST00000449477 176 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 Y_RNA.638-201ENST00000459374 113 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AP005660.1-201ENST00000522972 293 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.51□□□□□ -2.17
TREX1Q9NSU2 CLIC4P2-201ENST00000601934 717 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AL139286.2-201ENST00000606838 396 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 Z82243.1-201ENST00000609432 473 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AL353997.5-201ENST00000618886 171 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 AC022960.3-201ENST00000619794 441 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 HAUS6P2-201ENST00000433254 2404 ntBASIC1.51□□□□□ -2.17
TREX1Q9NSU2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 SNORD56.1-201ENST00000362913 68 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 RNU6-743P-201ENST00000364151 106 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 RNU6-487P-201ENST00000365430 104 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 MIR578-201ENST00000384828 96 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 RNU2-39P-201ENST00000410604 198 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 Y_RNA.608-201ENST00000410647 95 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AL589872.1-201ENST00000426602 288 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC006026.2-201ENST00000457376 180 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 RPL30P12-201ENST00000474666 353 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AL121594.1-201ENST00000475906 575 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC096745.1-201ENST00000509945 370 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 FAM206BP-201ENST00000510179 541 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 RNA5SP458-201ENST00000516188 119 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 RNU6-965P-201ENST00000516721 96 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 SCARNA1-201ENST00000517138 166 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 MIR5697-201ENST00000578045 78 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC012065.4-201ENST00000602445 679 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC012360.2-201ENST00000609349 391 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC104010.1-201ENST00000616889 150 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 U1.36-201ENST00000620684 176 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 SCARNA4-202ENST00000625402 129 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC006927.3-201ENST00000638789 384 ntBASIC1.5□□□□□ -2.17
TREX1Q9NSU2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TREX1Q9NSU2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TREX1Q9NSU2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TREX1Q9NSU2 OR4G2P-201ENST00000328113 903 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 snoU2_19.1-201ENST00000362361 80 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 Y_RNA.40-201ENST00000362645 93 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 U8.3-201ENST00000363321 132 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 RNU6-1210P-201ENST00000363775 107 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
TREX1Q9NSU2 RNU6-622P-201ENST00000384272 103 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 SNORA24.1-201ENST00000384401 135 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 RNU11-3P-201ENST00000391111 133 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AC074117.2-201ENST00000417130 397 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 C1DP2-201ENST00000418167 426 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 HMGB1P31-201ENST00000437242 427 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AL512286.1-201ENST00000439244 400 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 PRELID3BP1-201ENST00000457142 540 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AP001025.1-201ENST00000486139 332 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 RBBP4P6-201ENST00000508098 202 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AC117522.1-201ENST00000509821 380 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.49□□□□□ -2.17
TREX1Q9NSU2 SNORA43.2-201ENST00000516652 128 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 BNIP3P6-201ENST00000549284 499 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AC022254.1-201ENST00000567857 235 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AC025754.2-201ENST00000606491 432 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AP000240.1-201ENST00000609910 452 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.49□□□□□ -2.17
TREX1Q9NSU2 AC007792.1-201ENST00000623023 402 ntBASIC1.49□□□□□ -2.17
TREX1Q9NSU2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TREX1Q9NSU2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms