Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC006199.1-201ENST00000548728 219 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 IMMP1LP2-201ENST00000552954 492 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 CYCSP39-201ENST00000565821 309 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 FRG2DP-202ENST00000566967 323 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 OR1M4P-201ENST00000589199 287 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC020895.1-201ENST00000595362 272 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AL353621.2-201ENST00000605340 133 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC091903.1-201ENST00000624322 454 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 MTCO2P27-201ENST00000420740 428 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 RPL7P37-201ENST00000425095 738 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 RPL23AP58-201ENST00000440453 469 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AC130509.1-201ENST00000464158 433 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AC096745.1-201ENST00000509945 370 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 LINC00933-203ENST00000559812 219 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 MIR4506-201ENST00000584693 77 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AC010620.2-201ENST00000600135 313 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AL391813.1-201ENST00000603098 260 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AL133255.1-201ENST00000606374 441 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AC013412.1-201ENST00000610687 192 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 AC018692.3-201ENST00000623929 123 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 U6.99-201ENST00000637524 83 ntBASIC3.25□□□□□ -1.89
VPS45Q9NRW7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VPS45Q9NRW7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 RNU6-593P-201ENST00000364716 112 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 Y_RNA.482-201ENST00000384377 111 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 MIR34A-201ENST00000385130 110 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 RNU4-14P-201ENST00000410858 122 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 RPL32P35-201ENST00000415214 394 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC009414.1-201ENST00000427200 443 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 TOMM20P4-201ENST00000427861 435 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AL353705.1-201ENST00000433468 480 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 OSTCP8-201ENST00000445117 448 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 Y_RNA.701-201ENST00000516812 110 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AP005597.4-201ENST00000526762 229 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC008739.2-201ENST00000597006 317 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 uc_338.25-201ENST00000613756 156 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC126177.8-201ENST00000618339 1015 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC010378.1-201ENST00000619270 362 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 UCA1.1-201ENST00000620952 75 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AL359757.2-201ENST00000624309 274 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 AC010889.1-201ENST00000566193 2666 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VPS45Q9NRW7 ADAM3A-203ENST00000461344 2157 ntBASIC3.24□□□□□ -1.89
VPS45Q9NRW7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 Y_RNA.259-201ENST00000364619 101 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 SNORA51.4-201ENST00000364993 124 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 Y_RNA.315-201ENST00000365117 102 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 MIR10A-201ENST00000385043 110 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 AL096701.2-201ENST00000416920 238 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 AL645568.3-201ENST00000433683 316 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 AC244505.4-201ENST00000434905 287 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 SSXP5-201ENST00000443473 287 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 RPL31P41-201ENST00000477967 372 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 AC092436.3-201ENST00000511788 257 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 MIR3945-201ENST00000581853 98 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 AL355877.2-201ENST00000603670 358 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms