Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC006199.1-201ENST00000548728 219 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 HMGN2P15-201ENST00000585707 270 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AC078795.3-201ENST00000602913 472 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 MIR8076-201ENST00000611401 83 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.64□□□□□ -1.83
VTA1Q9NP79 AC091152.2-201ENST00000591628 2569 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VTA1Q9NP79 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VTA1Q9NP79 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC004944.1-201ENST00000517807 3059 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 RNU6-527P-201ENST00000363425 104 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 Y_RNA.197-201ENST00000364004 102 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 U8.8-201ENST00000365399 135 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 RNU6-310P-201ENST00000384655 107 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 RNU6-174P-201ENST00000410406 106 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AL356968.1-201ENST00000416622 474 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 RPL31P12-201ENST00000422587 358 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC002075.2-201ENST00000425207 252 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 RPS15AP5-201ENST00000436276 388 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 HMGN2P13-201ENST00000476476 274 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 RPS29P20-201ENST00000489592 171 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 RPL23AP49-201ENST00000492925 468 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC005741.1-201ENST00000511094 432 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC093303.1-201ENST00000514549 295 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 SNORD59.2-201ENST00000516873 68 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AP005902.1-201ENST00000521358 186 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC103996.1-201ENST00000555468 102 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AL080274.1-201ENST00000605565 220 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 AC093732.2-201ENST00000607950 274 ntBASIC3.63□□□□□ -1.83
VTA1Q9NP79 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VTA1Q9NP79 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VTA1Q9NP79 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VTA1Q9NP79 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTA1Q9NP79 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTA1Q9NP79 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTA1Q9NP79 RNU1-105P-201ENST00000363470 161 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 RNU6-1317P-201ENST00000364582 104 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 Y_RNA.646-201ENST00000410980 101 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 COTL1P1-201ENST00000422309 375 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 EIF4EP2-201ENST00000422816 654 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 MTCYBP6-201ENST00000441810 138 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC012308.1-201ENST00000451232 178 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 AL441985.1-201ENST00000457727 251 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC097462.2-201ENST00000504623 481 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 PTP4A1P4-201ENST00000512479 322 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 RNU6-976P-201ENST00000516086 111 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC009163.5-201ENST00000575421 637 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 MIR4273-201ENST00000582824 84 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC007742.2-201ENST00000618226 398 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC024581.2-201ENST00000619986 252 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 PLCE1P1-201ENST00000622094 305 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC006386.2-201ENST00000624491 75 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC012005.1-201ENST00000624575 75 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 MIR7153-201ENST00000637758 57 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.62□□□□□ -1.83
VTA1Q9NP79 AC007256.1-201ENST00000392253 2765 ntBASIC3.62□□□□□ -1.83
VTA1Q9NP79 MTND5P19-201ENST00000424872 1794 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 RNU6-227P-201ENST00000362865 103 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 SNORA14A-201ENST00000364773 135 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 RNU6-336P-201ENST00000364891 107 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 SNORA44-201ENST00000384584 132 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 RNU6-306P-201ENST00000384617 107 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 MRPL42P6-201ENST00000486397 371 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 RNU6-612P-201ENST00000516909 102 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 RNU6-711P-201ENST00000517255 106 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 AC023442.1-201ENST00000531247 422 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 CBX3P7-201ENST00000532876 502 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 AC022080.3-201ENST00000544433 482 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 AC025281.1-201ENST00000567026 265 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 RNU6-91P-201ENST00000607774 107 ntBASIC3.61□□□□□ -1.83
VTA1Q9NP79 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VTA1Q9NP79 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
VTA1Q9NP79 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VTA1Q9NP79 AL035425.3-201ENST00000564206 4996 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms