Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RNU6-426P-201ENST00000516464 97 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GCM1Q9NP62 UBL5P4-201ENST00000562584 236 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 MIR3684-201ENST00000579779 74 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 AL138963.2-201ENST00000605137 226 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 AC022441.3-201ENST00000605737 136 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 AC068831.7-201ENST00000616954 363 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 snoU18.1-201ENST00000629629 71 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 U6.99-201ENST00000637524 83 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GCM1Q9NP62 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GCM1Q9NP62 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.63□□□□□ -1.83
GCM1Q9NP62 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.63□□□□□ -1.83
GCM1Q9NP62 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.63□□□□□ -1.83
GCM1Q9NP62 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GCM1Q9NP62 RNU4-84P-201ENST00000364200 139 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 RNA5SP513-201ENST00000364648 118 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 RNA5SP205-201ENST00000364653 136 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 Y_RNA.273-201ENST00000364703 102 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 Y_RNA.353-201ENST00000365440 108 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 U8.10-201ENST00000384260 133 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 MTHFD2P2-201ENST00000407725 247 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 RNA5SP31-201ENST00000411144 127 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AC243964.1-201ENST00000441814 261 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.63□□□□□ -1.83
GCM1Q9NP62 RPS26P28-201ENST00000470806 348 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AC010409.1-201ENST00000487382 476 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AC091167.1-201ENST00000492017 396 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AL592156.1-201ENST00000508758 304 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 PARP4P3-201ENST00000510265 317 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 RNA5SP49-201ENST00000516450 115 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 SNORD116-25-201ENST00000516517 92 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 RNU6-58P-201ENST00000517143 103 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AP004607.1-201ENST00000524456 203 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.63□□□□□ -1.83
GCM1Q9NP62 MIR3138-201ENST00000585238 82 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 IPO5P1-202ENST00000600039 287 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 AC048347.1-201ENST00000624621 427 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GCM1Q9NP62 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
GCM1Q9NP62 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
GCM1Q9NP62 AC100821.1-201ENST00000523153 2479 ntBASIC3.63□□□□□ -1.83
GCM1Q9NP62 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GCM1Q9NP62 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AL109809.4-201ENST00000603520 2185 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GCM1Q9NP62 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GCM1Q9NP62 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 RNU1-108P-201ENST00000362556 161 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RNU1-14P-201ENST00000362759 152 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RNU5B-2P-201ENST00000363036 113 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 Y_RNA.238-201ENST00000364441 102 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 SNORD66.1-201ENST00000391230 76 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RNU6-257P-201ENST00000410238 98 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RNU2-37P-201ENST00000410695 177 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RPL27AP8-201ENST00000424277 446 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC069285.2-201ENST00000440210 275 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 TPT1P12-201ENST00000448968 492 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC010469.1-201ENST00000463864 576 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RPS27AP9-201ENST00000477681 438 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RPS4XP22-201ENST00000480755 780 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RPS4XP13-201ENST00000483219 789 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RN7SL691P-201ENST00000494487 301 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC091874.1-201ENST00000511402 339 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 RNA5SP73-201ENST00000516744 108 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC100770.1-201ENST00000532310 322 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC006064.5-201ENST00000541782 248 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 MED28P6-201ENST00000558776 231 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC055872.1-201ENST00000570978 278 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AL356157.2-201ENST00000605122 111 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC023043.4-201ENST00000612081 449 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 FAM27D1-201ENST00000612308 341 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 AC090132.2-201ENST00000615881 347 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 Y_RNA.778-201ENST00000620203 90 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 MIR6830-201ENST00000636015 70 ntBASIC3.62□□□□□ -1.83
GCM1Q9NP62 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GCM1Q9NP62 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GCM1Q9NP62 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
GCM1Q9NP62 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GCM1Q9NP62 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms