Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPL30P16-201ENST00000419341 429 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AL139281.1-201ENST00000422120 335 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 MTND4LP16-201ENST00000440828 295 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 BX510359.1-201ENST00000456973 237 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC096576.1-201ENST00000489014 359 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 RNU6-273P-201ENST00000516937 96 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 SNORA31.23-201ENST00000517219 133 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC104576.1-201ENST00000524225 88 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC103996.1-201ENST00000555468 102 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 MIR3944-201ENST00000581277 108 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 MIR4801-201ENST00000582704 82 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC011712.1-201ENST00000588959 234 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 VN1R107P-201ENST00000601784 209 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC073410.2-201ENST00000603240 332 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AC024581.2-201ENST00000619986 252 ntBASIC2.76□□□□□ -1.97
BRF2Q9HAW0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
BRF2Q9HAW0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 RPL9P7-201ENST00000330965 580 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 RNU6-428P-201ENST00000362942 107 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 Y_RNA.160-201ENST00000363677 92 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 U3.12-201ENST00000364498 214 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AL138885.1-201ENST00000405921 675 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AL513185.2-201ENST00000425543 193 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 RPL30P4-201ENST00000429309 333 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 RPL7P12-201ENST00000446719 750 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 RN7SKP256-201ENST00000517201 314 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AC026371.1-201ENST00000551867 419 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AL627309.6-201ENST00000606857 840 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRF2Q9HAW0 MIR8057-201ENST00000620957 69 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 AC007792.1-201ENST00000623023 402 ntBASIC2.75□□□□□ -1.97
BRF2Q9HAW0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RNU6-105P-201ENST00000363909 104 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RNU6-128P-201ENST00000383976 107 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RNU1-57P-201ENST00000384491 166 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 MIR23B-201ENST00000384832 97 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RNU6-293P-201ENST00000411259 106 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RPL19P1-201ENST00000411635 428 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 VN1R36P-201ENST00000414936 291 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 NUP35P1-201ENST00000422734 947 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AC013470.1-201ENST00000453438 462 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AC010486.1-201ENST00000511793 424 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 SMURF2P1-201ENST00000514992 481 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AP005597.4-201ENST00000526762 229 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 HPRT1P3-201ENST00000539521 576 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 BNIP3P16-201ENST00000589779 534 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 RPL23AP88-201ENST00000605759 454 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 AL136221.1-201ENST00000621449 509 ntBASIC2.74□□□□□ -1.97
BRF2Q9HAW0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
BRF2Q9HAW0 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 Y_RNA.72-201ENST00000362894 103 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RNU6-336P-201ENST00000364891 107 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RNU1-140P-201ENST00000365040 165 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 SNORA48.5-201ENST00000391143 135 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RNU6-510P-201ENST00000391239 108 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RNU2-23P-201ENST00000410545 195 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.73□□□□□ -1.97
BRF2Q9HAW0 AL117339.3-201ENST00000418733 162 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RPL35AP12-201ENST00000425362 338 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RBMX2P4-201ENST00000441256 376 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.73□□□□□ -1.97
BRF2Q9HAW0 AC104389.3-201ENST00000445629 235 ntBASIC2.73□□□□□ -1.97
BRF2Q9HAW0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.73□□□□□ -1.97
BRF2Q9HAW0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.73□□□□□ -1.97
BRF2Q9HAW0 RNU6-1037P-201ENST00000459571 107 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms