Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.80-201ENST00000362996 102 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-270P-201ENST00000364131 105 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 RNA5SP51-201ENST00000364750 119 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.314-201ENST00000365114 102 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.527-201ENST00000384573 102 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.533-201ENST00000384596 114 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 DBIP2-201ENST00000419076 262 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 MTCYBP10-201ENST00000424905 650 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 MTND3P9-201ENST00000429526 346 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AL353997.1-201ENST00000432936 108 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC006026.2-201ENST00000457376 180 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC128713.1-201ENST00000471495 306 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 RPS29P2-201ENST00000479278 136 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC006445.2-201ENST00000510061 472 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 SNORA43.2-201ENST00000516652 128 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 RNU4-77P-201ENST00000516692 156 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 SYF2P1-201ENST00000550658 413 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 NACAP3-201ENST00000552100 481 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 MIR5047-201ENST00000579212 100 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC008962.1-201ENST00000605729 304 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 CDC27P3-201ENST00000635418 1910 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.39-201ENST00000362620 98 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-527P-201ENST00000363425 104 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.144-201ENST00000363521 113 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-336P-201ENST00000364891 107 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-463P-201ENST00000384340 107 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.485-201ENST00000384395 102 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 SNORA1.3-201ENST00000384676 136 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.645-201ENST00000391229 102 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AL035423.1-201ENST00000420331 213 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 RPL23AP82-202ENST00000427528 469 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 SNORD105B-201ENST00000458770 79 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 RN7SL601P-201ENST00000471221 293 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 RN7SL293P-201ENST00000481765 281 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AC105758.1-201ENST00000506038 399 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AC010265.1-201ENST00000513509 211 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AP004607.1-201ENST00000524456 203 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AL117187.1-201ENST00000555482 181 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 MIR3609-201ENST00000582661 80 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 VN1R107P-201ENST00000601784 209 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AL158827.2-201ENST00000602494 330 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 HMGB1P24-202ENST00000615653 685 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 U4.6-201ENST00000621618 127 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AL606534.2-204ENST00000635008 178 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AL691447.3-201ENST00000635020 330 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 U6.98-201ENST00000637157 84 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 AC091812.1-201ENST00000432235 1948 ntBASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AMBRA1Q9C0C7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.89
AMBRA1Q9C0C7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
AMBRA1Q9C0C7 ZNF299P-201ENST00000406845 1804 ntBASIC3.21□□□□□ -1.89
AMBRA1Q9C0C7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-227P-201ENST00000362865 103 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-942P-201ENST00000363002 107 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-1309P-201ENST00000363305 108 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 RPS4XP3-201ENST00000398541 413 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AL138885.1-201ENST00000405921 675 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AC099548.1-201ENST00000421443 426 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 CYCSP4-201ENST00000429682 331 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms