Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-612P-201ENST00000516909 102 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AC090517.1-201ENST00000569307 266 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.19□□□□□ -1.9
TIMP4Q99727 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
TIMP4Q99727 AC006557.5-201ENST00000603126 811 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AP000787.2-201ENST00000604432 568 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AC007179.3-201ENST00000604976 235 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 MIR8076-201ENST00000611401 83 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 U6.98-201ENST00000637157 84 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TIMP4Q99727 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.19□□□□□ -1.9
TIMP4Q99727 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TIMP4Q99727 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
TIMP4Q99727 OTUD4P1-201ENST00000237841 3067 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 Y_RNA.19-201ENST00000362462 99 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNU6-595P-201ENST00000363944 107 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 Y_RNA.257-201ENST00000364596 102 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 Y_RNA.333-201ENST00000365274 102 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 Y_RNA.376-201ENST00000365638 108 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNU6-708P-201ENST00000384217 107 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNU6-166P-201ENST00000384371 107 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 MIR325-201ENST00000385260 98 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 SNORA40C-201ENST00000391285 128 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 AP000567.1-201ENST00000406413 156 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNA5SP31-201ENST00000411144 127 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.18□□□□□ -1.9
TIMP4Q99727 EIF4EP2-201ENST00000422816 654 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 AL590383.1-201ENST00000428602 75 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 HMGN2P16-201ENST00000456802 261 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 U3.44-201ENST00000458938 192 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNU6-1132P-201ENST00000459214 107 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 AC025518.1-201ENST00000479856 347 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RPS4XP13-201ENST00000483219 789 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNU6-408P-201ENST00000515910 100 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 RNU6-377P-201ENST00000515965 102 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 Y_RNA.680-201ENST00000516441 93 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.18□□□□□ -1.9
TIMP4Q99727 MIR5696-201ENST00000578474 85 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 AL645944.1-201ENST00000603857 493 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 AL159153.1-201ENST00000619688 317 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.18□□□□□ -1.9
TIMP4Q99727 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 U6.99-201ENST00000637524 83 ntBASIC3.18□□□□□ -1.9
TIMP4Q99727 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TIMP4Q99727 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.18□□□□□ -1.9
TIMP4Q99727 AC010615.1-201ENST00000594254 1764 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TIMP4Q99727 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.17□□□□□ -1.9
TIMP4Q99727 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TIMP4Q99727 OR56A5-201ENST00000340110 738 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TIMP4Q99727 SNORD50.1-201ENST00000362987 71 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 RNU6-770P-201ENST00000363929 105 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 RNU4-50P-201ENST00000364361 141 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 RNU6-741P-201ENST00000383889 107 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 Y_RNA.477-201ENST00000384352 108 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 Y_RNA.483-201ENST00000384380 101 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 Y_RNA.526-201ENST00000384572 110 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 PTMAP5-201ENST00000393073 333 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 SNORA11.1-201ENST00000408133 129 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
TIMP4Q99727 MTCO3P19-201ENST00000415864 321 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 RPL21P66-201ENST00000426566 466 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 ARF4P2-201ENST00000430209 526 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.17□□□□□ -1.9
TIMP4Q99727 AL078601.1-201ENST00000444542 271 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 HIGD1AP2-201ENST00000446367 280 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.17□□□□□ -1.9
TIMP4Q99727 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.17□□□□□ -1.9
TIMP4Q99727 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.17□□□□□ -1.9
TIMP4Q99727 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.17□□□□□ -1.9
TIMP4Q99727 RNU2-53P-201ENST00000516257 147 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 RNU6-897P-201ENST00000517135 105 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 IGKV2-23-201ENST00000518729 323 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TIMP4Q99727 AC023157.2-201ENST00000540596 141 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 SYF2P1-201ENST00000550658 413 ntBASIC3.17□□□□□ -1.9
TIMP4Q99727 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.17□□□□□ -1.9
TIMP4Q99727 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.17□□□□□ -1.9
TIMP4Q99727 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.17□□□□□ -1.9
TIMP4Q99727 MIR5701-3-201ENST00000578890 82 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms