Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.73□□□□□ -2.13
CDX2Q99626 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.73□□□□□ -2.13
CDX2Q99626 AL121821.2-201ENST00000556081 394 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 MIR548AB-201ENST00000584917 84 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AC011712.1-201ENST00000588959 234 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.73□□□□□ -2.13
CDX2Q99626 AC004223.4-201ENST00000612426 332 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AC122133.1-201ENST00000613964 233 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 SDR42E1P4-201ENST00000620894 481 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AC138627.2-201ENST00000624202 601 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AL133216.2-202ENST00000634512 349 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 Z99571.1-201ENST00000636677 394 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AC068137.4-201ENST00000638485 296 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 MTND5P30-201ENST00000452896 1731 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RNU4-21P-201ENST00000362802 126 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CDX2Q99626 SNORD116-9-201ENST00000384000 95 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 SNORD116-3-201ENST00000384287 95 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 SNORD116-7-201ENST00000384404 95 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RNU6-809P-201ENST00000384461 107 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 SNORD116-5-201ENST00000384462 95 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RNU6-748P-201ENST00000384648 107 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 Y_RNA.553-201ENST00000384670 102 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 HMGB3P2-201ENST00000411913 584 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 CYCSP48-201ENST00000417124 323 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.72□□□□□ -2.13
CDX2Q99626 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.72□□□□□ -2.13
CDX2Q99626 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.72□□□□□ -2.13
CDX2Q99626 PTGES3P4-201ENST00000426243 356 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC093106.2-201ENST00000428212 385 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AL365184.2-201ENST00000431139 435 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.72□□□□□ -2.13
CDX2Q99626 MTCO1P19-201ENST00000443487 500 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 MTND1P29-201ENST00000448112 647 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RPL23AP7-203ENST00000449021 469 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RNU6-717P-201ENST00000459076 104 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RPL7P43-201ENST00000478876 753 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC018437.1-201ENST00000492214 406 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC091435.1-201ENST00000505442 584 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RNU6-914P-201ENST00000516749 109 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RNU6-1315P-201ENST00000517187 99 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CDX2Q99626 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.72□□□□□ -2.13
CDX2Q99626 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.72□□□□□ -2.13
CDX2Q99626 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.72□□□□□ -2.13
CDX2Q99626 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.72□□□□□ -2.13
CDX2Q99626 MIR5697-201ENST00000578045 78 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC105245.1-201ENST00000581934 244 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 RSL24D1P11-201ENST00000591045 491 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC174048.1-201ENST00000603389 144 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AL031775.1-201ENST00000607014 887 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC022893.3-201ENST00000607665 437 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC138749.5-201ENST00000611461 208 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC073114.1-201ENST00000612027 490 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC084782.3-201ENST00000612282 578 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 MIR7844-201ENST00000616161 122 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC116165.2-201ENST00000616705 206 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 Z69908.1-201ENST00000622603 247 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AP003400.5-201ENST00000624827 617 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC006927.3-201ENST00000638789 384 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AC099654.13-201ENST00000639774 207 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 AL359854.1-201ENST00000614203 1594 ntBASIC1.72□□□□□ -2.13
CDX2Q99626 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDX2Q99626 U3.4-201ENST00000363352 213 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RNA5SP125-201ENST00000364843 120 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 Y_RNA.359-201ENST00000365498 102 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RNU6-166P-201ENST00000384371 107 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 MT-TH-201ENST00000387441 69 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AL031577.2-201ENST00000404133 280 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 MTCYBP36-201ENST00000404146 440 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RNA5SP338-201ENST00000410495 85 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RPS3AP44-201ENST00000425466 790 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 C8orf59P1-201ENST00000429930 303 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.71□□□□□ -2.14
CDX2Q99626 MTND1P27-201ENST00000451117 902 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AC092001.1-201ENST00000453012 261 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RNU6-953P-201ENST00000459154 107 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RPL37P6-201ENST00000460682 294 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AP001324.2-201ENST00000461163 319 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RAP1BP2-201ENST00000478270 544 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.71□□□□□ -2.14
CDX2Q99626 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.71□□□□□ -2.14
CDX2Q99626 MTCO3P7-201ENST00000510008 774 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.71□□□□□ -2.14
CDX2Q99626 AC116347.2-201ENST00000514912 523 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 RNU6-581P-201ENST00000516214 105 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AC025755.1-201ENST00000521306 278 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.71□□□□□ -2.14
CDX2Q99626 AC005730.3-201ENST00000583067 366 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.71□□□□□ -2.14
CDX2Q99626 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.71□□□□□ -2.14
CDX2Q99626 AC025165.5-201ENST00000602802 578 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 BNIP3P9-201ENST00000603714 553 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AL022154.1-201ENST00000604698 785 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 AC006338.1-201ENST00000618453 749 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.71□□□□□ -2.14
CDX2Q99626 AL390237.1-201ENST00000404226 1415 ntBASIC1.71□□□□□ -2.14
CDX2Q99626 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
CDX2Q99626 AL445523.1-201ENST00000451184 1362 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms