Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD1Q96NR3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD1Q96NR3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 AC090740.1-201ENST00000623193 2262 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 RNU6-858P-201ENST00000362436 107 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 RNU6-102P-201ENST00000384485 104 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 FTH1P15-201ENST00000406984 280 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 TBCAP1-201ENST00000436520 327 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 SSXP4-201ENST00000451349 245 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 MRPL42P6-201ENST00000486397 371 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 IGKV2-38-201ENST00000517443 247 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 AL451007.1-201ENST00000595491 289 ntBASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD1Q96NR3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AL672296.1-201ENST00000427780 2158 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.29-201ENST00000362570 113 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.269-201ENST00000364685 89 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.274-201ENST00000364714 101 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.297-201ENST00000364950 91 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 SNORD63-201ENST00000384262 68 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.555-201ENST00000384673 110 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RNU6-541P-201ENST00000384709 110 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RNA5SP213-201ENST00000391031 106 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RPS4XP3-201ENST00000398541 413 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 HMGN2P7-201ENST00000456186 273 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 SNRPGP7-201ENST00000469016 106 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RNU6-928P-201ENST00000516876 104 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AP006245.1-201ENST00000522549 120 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AC016256.1-201ENST00000547971 354 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 BRDTP1-201ENST00000605735 677 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AC012531.5-201ENST00000611375 151 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
PTCHD1Q96NR3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 RNU6-290P-201ENST00000365212 101 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 MIR544A-201ENST00000384855 91 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 RPL21P17-201ENST00000397467 475 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AL138878.1-201ENST00000405131 347 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 SNORA3C-201ENST00000408792 125 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 RNA5SP306-201ENST00000411087 107 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 RPS29P20-201ENST00000489592 171 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 HSPE1P4-201ENST00000550617 308 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AC091167.4-201ENST00000605079 184 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AC137590.2-201ENST00000619709 240 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AL773545.4-201ENST00000637262 310 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 AL513478.4-201ENST00000641636 310 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 MAPK10-372ENST00000641954 3413 ntBASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms