Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 AC006362.1-201ENST00000567392 174 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 MIR4781-201ENST00000585250 76 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 RSL24D1P11-201ENST00000591045 491 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 AL670379.10-201ENST00000604330 253 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 AL670379.9-201ENST00000605428 253 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 AC092656.1-203ENST00000624134 423 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 AC090582.1-201ENST00000636321 199 ntBASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RPGRIP1Q96KN7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC009487.4-201ENST00000624969 3585 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU6-1287P-201ENST00000362914 107 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 SNORD116-9-201ENST00000384000 95 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU6-72P-201ENST00000384285 79 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 SNORD116-3-201ENST00000384287 95 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 SNORD116-1-201ENST00000384335 95 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 SNORD116-7-201ENST00000384404 95 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 SNORD116-5-201ENST00000384462 95 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU6-1060P-201ENST00000384664 107 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU6-550P-201ENST00000391057 101 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 CYCSP49-201ENST00000420810 319 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 MTCO2P11-201ENST00000431069 680 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC132479.1-201ENST00000449160 144 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RPS29P15-201ENST00000458329 171 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU7-182P-201ENST00000459009 62 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RPL36AP48-201ENST00000485521 314 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU1-86P-201ENST00000516108 154 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU1-107P-201ENST00000516617 154 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 OR5AQ1P-201ENST00000527596 927 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 SUB1P2-201ENST00000556401 297 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AL391840.1-201ENST00000571144 367 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 MIR4498-201ENST00000577599 66 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AP005136.1-201ENST00000579765 429 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC068790.2-201ENST00000602601 557 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC009509.4-201ENST00000619202 509 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC009161.2-201ENST00000624626 138 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
RPGRIP1Q96KN7 RNU6-858P-201ENST00000362436 107 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 RNU6-942P-201ENST00000363002 107 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 RNU6-1029P-201ENST00000384109 107 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 SNORD116-2-201ENST00000384274 95 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 SNORD116-6-201ENST00000384711 96 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 U3.40-201ENST00000408706 208 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 RPS3AP44-201ENST00000425466 790 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 RPL23AP7-203ENST00000449021 469 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AC090515.1-201ENST00000465295 476 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AP002963.1-201ENST00000530590 184 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 MIR5692A1-201ENST00000580523 69 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AC073539.2-201ENST00000597113 165 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 RN7SKP299-201ENST00000606679 301 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AC091834.1-201ENST00000614543 472 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 DUXAP9-208ENST00000622815 614 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 SEPT14P19-203ENST00000633205 211 ntBASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPGRIP1Q96KN7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 Z75746.1-201ENST00000440243 2080 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 Y_RNA.359-201ENST00000365498 102 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 RNU4-48P-201ENST00000365559 182 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 RNU2-9P-201ENST00000410194 145 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 RNA5SP338-201ENST00000410495 85 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 AL353621.1-201ENST00000418219 243 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 PGBD4P6-201ENST00000421501 610 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 CALM1P1-201ENST00000442082 433 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 AC022364.2-201ENST00000457963 554 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 AC112771.1-201ENST00000463581 102 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 MED28P2-201ENST00000475771 317 ntBASIC2.29□□□□□ -2.04
RPGRIP1Q96KN7 RPL7P43-201ENST00000478876 753 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms