Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX11Q96FC9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX11Q96FC9 OR56A5-201ENST00000340110 738 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 RNU6-790P-201ENST00000384479 105 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 SNORD17-201ENST00000390930 237 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AL592148.1-201ENST00000413568 445 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 AC005326.1-201ENST00000429197 123 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AC087588.1-201ENST00000462203 316 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 ACA59.1-201ENST00000515966 143 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 RNU6-1315P-201ENST00000517187 99 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 RN7SKP40-201ENST00000517211 242 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 TRAV37-201ENST00000553906 342 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AC006600.1-201ENST00000572529 153 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 MIR3128-201ENST00000581957 66 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 AL161798.1-201ENST00000604630 131 ntBASIC4.04□□□□□ -1.76
DDX11Q96FC9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.04□□□□□ -1.76
DDX11Q96FC9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX11Q96FC9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX11Q96FC9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX11Q96FC9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX11Q96FC9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 Y_RNA.60-201ENST00000362831 98 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 SNORA38.1-201ENST00000364172 131 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 Y_RNA.526-201ENST00000384572 110 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 MIR514A1-201ENST00000385133 98 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 U3.19-201ENST00000390893 196 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 RNU2-38P-201ENST00000410856 79 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 AC139712.2-201ENST00000424302 339 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 OR2AQ1P-201ENST00000451972 200 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 AL049830.2-201ENST00000480072 201 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 RPS15AP34-201ENST00000487776 387 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 Y_RNA.687-201ENST00000516558 91 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 SNORA70.19-201ENST00000516717 90 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 AC007375.1-201ENST00000554513 578 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 AL157871.3-201ENST00000557231 293 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 MIR4273-201ENST00000582824 84 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 MIR1244-1-201ENST00000612829 85 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX11Q96FC9 MIR1244-3-201ENST00000635744 85 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 MIR1244-2-201ENST00000636449 85 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 MIR1244-4-202ENST00000636813 85 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 U6.98-201ENST00000637157 84 ntBASIC4.03□□□□□ -1.76
DDX11Q96FC9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX11Q96FC9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
DDX11Q96FC9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX11Q96FC9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX11Q96FC9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX11Q96FC9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX11Q96FC9 AP001148.1-201ENST00000624124 2359 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 RNA5SP295-201ENST00000362655 121 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 Y_RNA.64-201ENST00000362845 102 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 RNU6-1167P-201ENST00000363227 94 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 U8.8-201ENST00000365399 135 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AP002088.1-201ENST00000382740 395 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 Y_RNA.533-201ENST00000384596 114 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AL591034.2-201ENST00000402839 359 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AP000567.1-201ENST00000406413 156 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AC005300.1-201ENST00000428401 373 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 MYL8P-204ENST00000431574 518 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AC092573.2-201ENST00000434546 243 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AC084851.1-201ENST00000529105 249 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 HSPE1P20-201ENST00000538133 289 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.02□□□□□ -1.77
DDX11Q96FC9 MIR1273C-201ENST00000578669 77 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AC005000.2-201ENST00000605468 310 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 AL159153.1-201ENST00000619688 317 ntBASIC4.02□□□□□ -1.77
DDX11Q96FC9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
DDX11Q96FC9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX11Q96FC9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
DDX11Q96FC9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.02□□□□□ -1.77
DDX11Q96FC9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX11Q96FC9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX11Q96FC9 RNU6-770P-201ENST00000363929 105 ntBASIC4.01□□□□□ -1.77
DDX11Q96FC9 RNU4-50P-201ENST00000364361 141 ntBASIC4.01□□□□□ -1.77
DDX11Q96FC9 RNU6-1317P-201ENST00000364582 104 ntBASIC4.01□□□□□ -1.77
DDX11Q96FC9 MIR625-201ENST00000385047 85 ntBASIC4.01□□□□□ -1.77
DDX11Q96FC9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX11Q96FC9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX11Q96FC9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX11Q96FC9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX11Q96FC9 HIGD1AP2-201ENST00000446367 280 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms