Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC025165.5-201ENST00000602802 578 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 APOOP1-201ENST00000604695 592 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 AC080013.6-201ENST00000606185 215 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS33AQ96AX1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.4□□□□□ -2.02
VPS33AQ96AX1 SNORD62.1-201ENST00000362541 86 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 SNORA25B-201ENST00000365507 128 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 Y_RNA.559-201ENST00000384686 107 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 MIR29B2-201ENST00000385055 81 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 MIR9-1-201ENST00000385198 89 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 AL360182.1-201ENST00000397433 468 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 AL591034.2-201ENST00000402839 359 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 AL117339.3-201ENST00000418733 162 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS33AQ96AX1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 FDX1P2-201ENST00000450769 375 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 AC107222.1-201ENST00000510899 637 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 RN7SKP132-201ENST00000516001 208 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS33AQ96AX1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS33AQ96AX1 AC090115.3-201ENST00000553218 849 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS33AQ96AX1 HULC.1-201ENST00000612720 240 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS33AQ96AX1 OR5AK4P-201ENST00000635912 903 ntBASIC2.4□□□□□ -2.03
VPS33AQ96AX1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
VPS33AQ96AX1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS33AQ96AX1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 RNU1-23P-201ENST00000363361 144 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 Y_RNA.194-201ENST00000363985 102 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 SNORD46.1-201ENST00000364139 104 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 RNU4-24P-201ENST00000364565 139 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 RNU1-91P-201ENST00000364746 163 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 RPS29P13-201ENST00000402041 169 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AF274854.1-201ENST00000413236 615 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 USP9YP18-201ENST00000425912 695 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 TIMM9P3-201ENST00000428659 274 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 USP9YP8-201ENST00000441913 500 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AC107401.1-201ENST00000503426 685 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 MIR3126-201ENST00000577443 74 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AC097065.2-201ENST00000608159 533 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AL158209.2-201ENST00000619266 216 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 AC097372.5-201ENST00000623665 376 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 MIR6863-201ENST00000636112 90 ntBASIC2.39□□□□□ -2.03
VPS33AQ96AX1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 MIR208A-201ENST00000362287 71 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 RNU6-336P-201ENST00000364891 107 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 OR5H15-201ENST00000383696 930 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 SNORA9-201ENST00000384215 133 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 MIR544A-201ENST00000384855 91 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 RNA5SP270-201ENST00000411361 118 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC105272.1-201ENST00000438604 198 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC243964.1-201ENST00000441814 261 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC018868.1-201ENST00000491307 315 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 CCDC34P1-201ENST00000507441 517 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 RNA5SP137-201ENST00000516833 135 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC034114.1-201ENST00000520293 285 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC121758.2-201ENST00000553271 193 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AL161423.1-201ENST00000613700 262 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AL359880.1-201ENST00000621879 266 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC124864.2-201ENST00000624736 186 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC090517.3-201ENST00000625170 141 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
VPS33AQ96AX1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS33AQ96AX1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS33AQ96AX1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS33AQ96AX1 RNU6-1085P-201ENST00000363576 107 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 RNU6-82P-201ENST00000363970 107 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 Y_RNA.381-201ENST00000365666 102 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 MTCO3P40-201ENST00000392516 676 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 RNU6-293P-201ENST00000411259 106 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 EDDM3CP-201ENST00000415977 425 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms