Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR518A2-201ENST00000384966 87 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 SNORD70.1-201ENST00000391007 85 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 HMGB3P2-201ENST00000411913 584 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 MTND4P32-201ENST00000437189 1237 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 AC108938.1-201ENST00000451204 136 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AL109933.2-201ENST00000452651 260 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AL356010.1-201ENST00000456364 102 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 SNRPFP3-201ENST00000457792 225 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 RNU6-956P-201ENST00000458868 103 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 RN7SKP24-201ENST00000515888 284 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AP000873.5-201ENST00000533906 236 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 RSL24D1P11-201ENST00000591045 491 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 AC005034.5-201ENST00000604219 466 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 AC022202.1-201ENST00000613515 211 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
PTP4A1Q93096 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PTP4A1Q93096 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
PTP4A1Q93096 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PTP4A1Q93096 RNA5SP68-201ENST00000363885 119 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 RNU1-51P-201ENST00000365345 176 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 AL445529.1-201ENST00000398713 389 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 RNU2-9P-201ENST00000410194 145 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 SRIP3-201ENST00000413200 219 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 MTATP6P18-201ENST00000417994 673 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 AL360221.1-201ENST00000445989 335 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 RPL23AP45-201ENST00000476406 468 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 AC022447.4-201ENST00000504053 364 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 BNIP3P16-201ENST00000589779 534 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 AC005609.4-201ENST00000625071 447 ntBASIC2.17□□□□□ -2.06
PTP4A1Q93096 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.17□□□□□ -2.06
PTP4A1Q93096 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 RNU4-56P-201ENST00000364700 142 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 RN7SKP284-201ENST00000411002 343 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 HMGN2P38-201ENST00000423806 265 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 MTCO2P11-201ENST00000431069 680 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 RPS15AP10-201ENST00000432472 382 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 AL353752.1-201ENST00000454946 260 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 AL122001.1-201ENST00000457027 370 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 SCARNA18-201ENST00000459004 134 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 RNA5SP320-201ENST00000516263 124 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 MIR3136-201ENST00000583498 78 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 VN1R107P-201ENST00000601784 209 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.16□□□□□ -2.06
PTP4A1Q93096 AC004908.3-201ENST00000610248 625 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 Z69908.1-201ENST00000622603 247 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 ZNF720P1-201ENST00000562403 1939 ntBASIC2.16□□□□□ -2.06
PTP4A1Q93096 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
PTP4A1Q93096 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 RNU5A-6P-201ENST00000384136 116 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 RNU6-517P-201ENST00000384362 110 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 RNA5SP465-201ENST00000391195 109 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AL358934.1-201ENST00000432346 324 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AL513328.1-201ENST00000446460 224 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 RNU2-69P-201ENST00000516061 100 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 CYCSP27-201ENST00000527643 293 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC078814.3-201ENST00000553036 491 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC007375.1-201ENST00000554513 578 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.15□□□□□ -2.07
PTP4A1Q93096 AC073648.5-201ENST00000603502 305 ntBASIC2.15□□□□□ -2.07
PTP4A1Q93096 AL356157.2-201ENST00000605122 111 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms