Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 RNU6-95P-201ENST00000384697 107 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 SNORD15B-201ENST00000384714 146 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 MIR548K-201ENST00000408406 116 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 RNA5SP390-201ENST00000410191 113 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 AP001324.2-201ENST00000461163 319 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 RNU6-507P-201ENST00000516045 100 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 AP005639.2-201ENST00000527592 928 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 AC009314.1-201ENST00000603871 304 ntBASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.65□□□□□ -1.83
PRPF38AQ8NAV1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 RNA5SP383-201ENST00000362934 120 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 RNU6-336P-201ENST00000364891 107 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 U3.26-201ENST00000391236 204 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AL030996.1-201ENST00000411430 235 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 SNORA64.4-201ENST00000516632 81 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 RNU1-54P-201ENST00000517181 120 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AC105029.1-201ENST00000520250 669 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AC022080.3-201ENST00000544433 482 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 LARP7P3-201ENST00000579888 337 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AC093732.2-201ENST00000607950 274 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AC005046.1-201ENST00000608515 625 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AL591516.1-201ENST00000611326 274 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 AL133216.2-202ENST00000634512 349 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 MTND5P30-201ENST00000452896 1731 ntBASIC3.64□□□□□ -1.83
PRPF38AQ8NAV1 MTND4P23-201ENST00000447723 1363 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 SNORD62.1-201ENST00000362541 86 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 SNORD56.1-201ENST00000362913 68 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RNU6-428P-201ENST00000362942 107 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 SNORD56.3-201ENST00000363507 71 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 Y_RNA.184-201ENST00000363884 108 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RNU6-593P-201ENST00000364716 112 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 SNORA44-201ENST00000384584 132 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RN7SKP220-201ENST00000410611 288 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RNU2-41P-201ENST00000410991 178 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RN7SL283P-201ENST00000489055 303 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RPL22P13-201ENST00000493291 347 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RPS27P27-201ENST00000498779 255 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 MTND5P5-201ENST00000503764 376 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 CKS1BP7-201ENST00000522230 235 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 TRAV32-201ENST00000553993 340 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 AL137843.1-201ENST00000605078 385 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 RBBP8P1-201ENST00000449447 1844 ntBASIC3.63□□□□□ -1.83
PRPF38AQ8NAV1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 FAM35CP-201ENST00000554755 2470 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 RPL9P7-201ENST00000330965 580 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 SNORA68.1-201ENST00000364537 132 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 MIR548F5-201ENST00000408421 86 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 RPL37P10-201ENST00000412884 288 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 COTL1P1-201ENST00000422309 375 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AL513043.1-201ENST00000439124 535 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 PCMTD1P1-201ENST00000455560 355 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 HMGN1P18-201ENST00000457642 277 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 RPL9P9-202ENST00000466501 579 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AC097462.2-201ENST00000504623 481 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 FGF7P4-201ENST00000509595 295 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 SNORA31.23-201ENST00000517219 133 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AC105137.2-201ENST00000569073 466 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 AL356157.2-201ENST00000605122 111 ntBASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF38AQ8NAV1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF38AQ8NAV1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF38AQ8NAV1 AL133475.1-201ENST00000404414 305 ntBASIC3.61□□□□□ -1.83
PRPF38AQ8NAV1 RN7SKP158-201ENST00000410453 326 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms