Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 MIR4424-201ENST00000585257 86 ntBASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 AL354685.2-201ENST00000448218 1447 ntBASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 AC069528.2-201ENST00000624849 1991 ntBASIC1.79□□□□□ -2.12
LINC01561Q8N1V8 RNU6-1159P-201ENST00000362933 107 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 RNU6-1322P-201ENST00000364309 107 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 RNU1-140P-201ENST00000365040 165 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 Y_RNA.359-201ENST00000365498 102 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 RNU6-142P-201ENST00000384019 107 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 SNORD116-2-201ENST00000384274 95 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 SNORD116-6-201ENST00000384711 96 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 RNU6-1106P-201ENST00000390845 107 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 RPL17P50-201ENST00000396131 546 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AL138827.1-201ENST00000402666 306 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AL591416.1-201ENST00000404015 867 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AL663109.1-201ENST00000411498 844 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 MTCYBP8-201ENST00000422855 651 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 SNAP23P1-201ENST00000433229 246 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 GPM6BP3-201ENST00000442797 145 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 MTND1P29-201ENST00000448112 647 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 PSPHP1-201ENST00000450062 261 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 TPT1P7-201ENST00000458300 517 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 RNA5SP233-201ENST00000459153 113 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 FAM133DP-201ENST00000464802 691 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 MTCO3P38-201ENST00000468910 766 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AC083798.1-201ENST00000472671 131 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AC132942.1-201ENST00000486753 483 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 HMGB1P35-201ENST00000503360 598 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 MIR3158-1-201ENST00000583596 81 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 MIR4635-201ENST00000583759 79 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AL137847.3-201ENST00000611521 109 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 AL354950.2-201ENST00000617939 290 ntBASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LINC01561Q8N1V8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC092268.1-201ENST00000342691 405 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 RNU4-56P-201ENST00000364700 142 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 MIR518A2-201ENST00000384966 87 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 SNORA26.3-201ENST00000391119 136 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AL606923.1-201ENST00000406616 190 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC096664.2-201ENST00000411843 406 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AL353193.1-201ENST00000421444 268 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 RPL23AP95-201ENST00000426806 265 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 TIMM9P3-201ENST00000428659 274 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 IFNA20P-201ENST00000436840 528 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AL451074.3-201ENST00000437709 472 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 RNU7-138P-201ENST00000459479 64 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC091885.1-201ENST00000506658 268 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 RNA5SP282-201ENST00000516355 108 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 SNORA74D-201ENST00000516404 141 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 PRELID2P1-201ENST00000552837 301 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC034105.4-201ENST00000568304 277 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AL034555.1-201ENST00000604816 211 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 HULC.1-201ENST00000612720 240 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC097372.5-201ENST00000623665 376 ntBASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC01561Q8N1V8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 snoU2_19.1-201ENST00000362361 80 ntBASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 RNU6-944P-201ENST00000364023 107 ntBASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 U3.13-201ENST00000364804 214 ntBASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 RNU6-43P-201ENST00000384302 107 ntBASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 RNA5SP465-201ENST00000391195 109 ntBASIC1.76□□□□□ -2.13
LINC01561Q8N1V8 AL512604.1-201ENST00000404812 257 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms