Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 RN7SKP104-201ENST00000362605 328 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.310-201ENST00000365063 113 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 RNU1-64P-201ENST00000365443 163 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.456-201ENST00000384232 111 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 AC063976.4-201ENST00000421971 163 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 CKS1BP6-201ENST00000424932 240 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 AC092017.2-201ENST00000427600 362 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 MIR4724-201ENST00000579485 89 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 RN7SL52P-201ENST00000584271 284 ntBASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC116Q8IYX3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 Y_RNA.243-201ENST00000364481 109 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 SNORD87-201ENST00000364849 89 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 RNU6-487P-201ENST00000365430 104 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 U1.1-201ENST00000384101 164 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 NDUFB4P6-201ENST00000436819 366 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 PSMD10P3-201ENST00000437000 448 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 AL714022.1-201ENST00000439897 151 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 SNORD108-201ENST00000459332 71 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 AC083982.1-201ENST00000485679 344 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 RPS27AP10-201ENST00000496103 208 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 AC134698.5-201ENST00000519444 336 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 MIR3136-201ENST00000583498 78 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 CR381572.2-201ENST00000624852 397 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 U6.95-201ENST00000636931 70 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 AC022336.2-201ENST00000568966 2538 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 CENPCP1-201ENST00000533085 2578 ntBASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC116Q8IYX3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AC126323.6-202ENST00000568092 3511 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 MIR367-201ENST00000362299 68 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 MIR3074-201ENST00000384885 81 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 SNORA40.5-201ENST00000391061 128 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AL645927.1-201ENST00000396783 406 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 CBX3P9-201ENST00000402326 552 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AC114755.2-201ENST00000413520 361 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 Y_RNA.757-201ENST00000578934 114 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AC022726.1-201ENST00000587475 207 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AC108081.1-201ENST00000604358 221 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 SNORD11B-201ENST00000607707 90 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 SALL4P2-201ENST00000423288 2910 ntBASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC116Q8IYX3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 U3.30-201ENST00000391308 210 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 CYCSP49-201ENST00000420810 319 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 RPL36AP10-201ENST00000421785 322 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 SNRPGP5-201ENST00000456003 220 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 RPL7AP28-201ENST00000464513 571 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AC006199.1-201ENST00000548728 219 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 MIR5699-201ENST00000578903 90 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 MIR4646-201ENST00000580775 63 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 RN7SL435P-201ENST00000584418 282 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 FAM27B-201ENST00000610601 213 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 MIR7155-201ENST00000615925 56 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AC068870.2-201ENST00000620635 389 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 AC002543.1-201ENST00000299783 1954 ntBASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms